RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 CDC16Q13042 620 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 SNTA1Q13424 505 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 GKAP1Q5VSY0 366 aaPredicted RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 ZNF280DQ6N043 979 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 GLDNQ6ZMI3 551 aaPredicted RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 CLEC17AQ6ZS10 378 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 DCP1BQ8IZD4 617 aaKnown RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 SRBD1Q8N5C6 995 aaKnown RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 PCDH20Q8N6Y1 951 aaKnown RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 ZNF441Q8N8Z8 693 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 CSNK2A3Q8NEV1 391 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 OR8K5Q8NH50 307 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 SLC20A1Q8WUM9 679 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 SGCDQ92629 289 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 ABTB1Q969K4 478 aaPredicted RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 TMEM19Q96HH6 336 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 IGSF21Q96ID5 467 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 LMLNQ96KR4 655 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 ZNF385AQ96PM9 386 aaKnown RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 SEPT5Q99719 369 aaPredicted RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 KAT14Q9H8E8 782 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 UBTD1Q9HAC8 227 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 PLEKHA5Q9HAU0 1116 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 TMEM30AQ9NV96 361 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 MCM9Q9NXL9 1143 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 COPG2Q9UBF2 871 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 OR14J1Q9UGF5 321 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 SIX4Q9UIU6 781 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 ACSL5Q9ULC5 683 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 LYVE1Q9Y5Y7 322 aa3.85□□□□□ -1.79
MDM2-216ENST00000471946 RSF1Q96T23 1441 aaPredicted RBP3.85□□□□□ -1.79
MDM2-216ENST00000471946 PLSCR5A0PG75 271 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 DENND3A2RUS2 1198 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 GOLGA6L9A6NEM1 432 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 M0QZ24 198 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 TULP2O00295 520 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 CLGNO14967 610 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 SPINT2O43291 252 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 NDUFS3O75489 264 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 TIPRLO75663 272 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 CAMTA2O94983 1202 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 KCNK5O95279 499 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 OR2C1O95371 312 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 ACADMP11310 421 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 CDH2P19022 906 aaPredicted RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 APOBEC1P41238 236 aaKnown RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 PIK3CAP42336 1068 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 PRCPP42785 496 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 RRP1P56182 461 aaKnown RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 FOXM1Q08050 763 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 TNFAIP1Q13829 316 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 MAPRE1Q15691 268 aaKnown RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 ADIPOQQ15848 244 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 ZSCAN23Q3MJ62 389 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 KCNT1Q5JUK3 1230 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 DCST1Q5T197 706 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 CCNI2Q6ZMN8 369 aaPredicted RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 C4orf50Q6ZRC1 276 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 CACNA2D4Q7Z3S7 1137 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 NRROSQ86YC3 692 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 TTC39CQ8N584 583 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 RBMXL3Q8N7X1 1067 aaKnown RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 SPATA20Q8TB22 786 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 SCFD2Q8WU76 684 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 POMGNT1Q8WZA1 660 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 FIG4Q92562 907 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 C1orf74Q96LT6 269 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 BARD1Q99728 777 aaKnown RBP3.84□□□□□ -1.79
MDM2-216ENST00000471946 UBA5Q9GZZ9 404 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 BLOC1S4Q9NUP1 217 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 MTMR10Q9NXD2 777 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 ZNF224Q9NZL3 707 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 PADI1Q9ULC6 663 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 PROCRQ9UNN8 238 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 MTMR6Q9Y217 621 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 CLIC4Q9Y696 253 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 PRAG1Q86YV5 1406 aa3.84□□□□□ -1.79
MDM2-216ENST00000471946 A0A1B0GUV1 79 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 SMTNL1A8MU46 457 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 PTGES3LE9PB15 166 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 H3BQ06 376 aaPredicted RBP3.83□□□□□ -1.8
MDM2-216ENST00000471946 ATP2A1O14983 1001 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 HCRTR2O43614 444 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 ZBED4O75132 1171 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 SCGB1D1O95968 90 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 ICAM1P05362 532 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 SNRNP70P08621 437 aaKnown RBP3.83□□□□□ -1.8
MDM2-216ENST00000471946 MYOD1P15172 320 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 HOXC9P31274 260 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 HADHAP40939 763 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 UBA7P41226 1012 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 TMPOP42166 694 aaKnown RBP3.83□□□□□ -1.8
MDM2-216ENST00000471946 KRTAP10-9P60411 292 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 ARF3P61204 181 aaPredicted RBP3.83□□□□□ -1.8
MDM2-216ENST00000471946 ISL1P61371 349 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 PRAMEP78395 509 aa3.83□□□□□ -1.8
MDM2-216ENST00000471946 ARF1P84077 181 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms