RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ETS1P14921 441 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 RPL22P35268 128 aaKnown RBP15.2■□□□□ 0.02
SDC3-203ENST00000471567 KCNJ1P48048 391 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 PDE1BQ01064 536 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 OLIG2Q13516 323 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 SEMA5AQ13591 1074 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 SPARCL1Q14515 664 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 HS1BP3Q53T59 392 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 RBFAQ8N0V3 343 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 GLIS1Q8NBF1 620 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 OR4C6Q8NH72 309 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 LMX1AQ8TE12 382 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 OR1E3Q8WZA6 343 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 COX14Q96I36 57 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 DUSP23Q9BVJ7 150 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 SPATA16Q9BXB7 569 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 AP1M1Q9BXS5 423 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 TCEAL2Q9H3H9 227 aaPredicted RBP15.2■□□□□ 0.02
SDC3-203ENST00000471567 FGF22Q9HCT0 170 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 RAB6BQ9NRW1 208 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 NLGN3Q9NZ94 848 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 FTSJ1Q9UET6 329 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 SLC17A4Q9Y2C5 497 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 PKP3Q9Y446 797 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 GOLGA6L10A0A0M3HER8 536 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 PRSS38A1L453 326 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 FADS2P1A8MWK0 482 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 E7EVH7 732 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 LMO7DNF2Z398 122 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 ZNF185O15231 689 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 STX7O15400 261 aaKnown RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 LDOC1O95751 146 aaPredicted RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 SLC4A1P02730 911 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 CEACAM5P06731 702 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 IVLP07476 585 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 ZSCAN5DPP0CG00 497 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 GIMD1P0DJR0 217 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 CTSEP14091 401 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 LPOP22079 712 aaPredicted RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 ELOCQ15369 112 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 PRRT3Q5FWE3 981 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 RD3Q7Z3Z2 195 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 PRUNE1Q86TP1 453 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 TAB3Q8N5C8 712 aaPredicted RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 PDXPQ96GD0 296 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 SCARF2Q96GP6 870 aaPredicted RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 LRRC61Q9BV99 259 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 BPIFA1Q9NP55 256 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 CNOT6Q9ULM6 557 aaKnown RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 SAR1BQ9Y6B6 198 aa15.19■□□□□ 0.02
SDC3-203ENST00000471567 TDRD6O60522 2096 aaKnown RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 COL5A1P20908 1838 aaPredicted RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 ARID1BQ8NFD5 2236 aaPredicted RBP15.19■□□□□ 0.02
SDC3-203ENST00000471567 SPAARA0A1B0GVQ0 90 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 TRIM38O00635 465 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 COILP38432 576 aaPredicted RBP15.18■□□□□ 0.02
SDC3-203ENST00000471567 SPAM1P38567 509 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 LMAN1P49257 510 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 FNTAP49354 379 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 SIM1P81133 766 aaPredicted RBP15.18■□□□□ 0.02
SDC3-203ENST00000471567 ALS2CLQ60I27 953 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 TTC27Q6P3X3 843 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 FAM181AQ8N9Y4 354 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 CNDP2Q96KP4 475 aaKnown RBP15.18■□□□□ 0.02
SDC3-203ENST00000471567 CLPBQ9H078 707 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 CAAP1Q9H8G2 361 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 CYP4F12Q9HCS2 524 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 IL26Q9NPH9 171 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 MRPL40Q9NQ50 206 aaKnown RBP15.18■□□□□ 0.02
SDC3-203ENST00000471567 EIF2B3Q9NR50 452 aaKnown RBP15.18■□□□□ 0.02
SDC3-203ENST00000471567 SMARCAL1Q9NZC9 954 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 VPS18Q9P253 973 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 RNF14Q9UBS8 474 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 MOSPD1Q9UJG1 213 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 ARL5AQ9Y689 179 aa15.18■□□□□ 0.02
SDC3-203ENST00000471567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 INPP4BO15327 924 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 FFAR2O15552 330 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 SIGLEC6O43699 453 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 PHF2O75151 1096 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 GAS8O95995 478 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 ANXA6P08133 673 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 KCNA4P22459 653 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 CDH17Q12864 832 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 C1orf61Q13536 156 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 PROX2Q3B8N5 592 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 N4BP2L1Q5TBK1 243 aaPredicted RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 KCTD16Q68DU8 428 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 ZCCHC8Q6NZY4 707 aaKnown RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 CCDC137Q6PK04 289 aaKnown RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 GKN2Q86XP6 184 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 CREG2Q8IUH2 290 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 GRK7Q8WTQ7 553 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 SCG3Q8WXD2 468 aaKnown RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 GLYATL1Q969I3 302 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 VPS35Q96QK1 796 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 RMI1Q9H9A7 625 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 CARS2Q9HA77 564 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms