RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 HOXD13P35453 343 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PPARGP37231 505 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 CXCR3P49682 368 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 FGFBP1Q14512 234 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 HIST2H2ACQ16777 129 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 NUGGCQ68CJ6 796 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 HIST2H2BCQ6DN03 193 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 HIST2H2BDQ6DRA6 164 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 CAVIN1Q6NZI2 390 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 NCEH1Q6PIU2 408 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 SHC4Q6S5L8 630 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 CCDC129Q6ZRS4 1044 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 TMC8Q8IU68 726 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 RPAP2Q8IXW5 612 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 ZDHHC23Q8IYP9 409 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 TTC39CQ8N584 583 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 GJC3Q8NFK1 279 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 NAF1Q96HR8 494 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 MXRA8Q9BRK3 442 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 STRA6Q9BX79 667 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 NPFFR1Q9GZQ6 430 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 KLHL31Q9H511 634 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 DCTPP1Q9H773 170 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 FBRSL1Q9HCM7 1045 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 NRIP3Q9NQ35 241 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 TRNAU1APQ9NX07 287 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PLK2Q9NYY3 685 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 ABI3Q9P2A4 366 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PTGFRNQ9P2B2 879 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 ADD3Q9UEY8 706 aaKnown RBP4.3□□□□□ -1.72
SRRM1-208ENST00000470243 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 FAM96BQ9Y3D0 163 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 SLC4A4Q9Y6R1 1079 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 A3GALT2U3KPV4 340 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 LAMB1P07942 1786 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 XIRP2A4UGR9 3374 aa4.3□□□□□ -1.72
SRRM1-208ENST00000470243 SCN7AQ01118 1682 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 TTC21BQ7Z4L5 1316 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 UQCRHLA0A096LP55 91 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 A0A0U1RQF3 1178 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 TTC36A6NLP5 189 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 STMND1H3BQB6 276 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 K7ENM7 598 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 TAF4O00268 1085 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 MDM4O15151 490 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 KIF1CO43896 1103 aaKnown RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 HNRNPCL1O60812 293 aaKnown RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 HMMRO75330 724 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 MT-CYBP00156 380 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 EIF2S1P05198 315 aaKnown RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 TPM3P06753 285 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 UQCRHP07919 91 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 IRF1P10914 325 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 RARGP13631 454 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 KRT10P13645 584 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 CDAP32320 146 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 AVPR1AP37288 418 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 PIP4K2AP48426 406 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 F2RL1P55085 397 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 MC1RQ01726 317 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 GOLGA8DPQ0D2H9 430 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 CUL4AQ13619 759 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 CCNG2Q16589 344 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 SRSF7Q16629 238 aaKnown RBP eCLIP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 DPCR1Q3MIW9 517 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 ODF3L2Q3SX64 289 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 MTX3Q5HYI7 312 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 EPHA10Q5JZY3 1008 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 PRAMEF19Q5SWL8 479 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 HEPHL1Q6MZM0 1159 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 TSSK4Q6SA08 328 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 LCTLQ6UWM7 567 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 SZRD1Q7Z422 152 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 CTU1Q7Z7A3 348 aaKnown RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 DENND6AQ8IWF6 608 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 FAM149B1Q96BN6 582 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 COQ8BQ96D53 544 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 MMABQ96EY8 250 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 NEUROD6Q96NK8 337 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 WDR77Q9BQA1 342 aaPredicted RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 POLDIP3Q9BY77 421 aaKnown RBP4.29□□□□□ -1.72
SRRM1-208ENST00000470243 KIF9Q9HAQ2 790 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 HCFC1R1Q9NWW0 138 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 NSMCE4AQ9NXX6 385 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 EHD2Q9NZN4 543 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 NDRG3Q9UGV2 375 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 RABGAP1Q9Y3P9 1069 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 LYVE1Q9Y5Y7 322 aa4.29□□□□□ -1.72
SRRM1-208ENST00000470243 MUC6Q6W4X9 2439 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms