RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 IKZF3Q9UKT9 509 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 PCDHGB7Q9Y5F8 929 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 OR6C75A6NL08 312 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 INSIG1O15503 277 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SRP72O76094 671 aaKnown RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 LINC00032P0C843 101 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CHRM3P20309 590 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SLC11A2P49281 568 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SMAD3P84022 425 aaKnown RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 MS4A2Q01362 244 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 IL10RBQ08334 325 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 TSNQ15631 228 aaKnown RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PTPRNQ16849 979 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SLC44A4Q53GD3 710 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 HECTD3Q5T447 861 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PSAPL1Q6NUJ1 521 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PAOXQ6QHF9 649 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 ISCA2Q86U28 154 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 NPAS4Q8IUM7 802 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 MDGA1Q8NFP4 955 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 OR4L1Q8NH43 312 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SEMA6AQ9H2E6 1030 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SCUBE2Q9NQ36 999 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 VPS28Q9UK41 221 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 ANKRD6Q9Y2G4 727 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF840PA6NDX5 716 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 TMEM114B3SHH9 223 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SDHDO14521 159 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PRAMEF11O60813 436 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 TBL1XO60907 577 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 RNASEH1O60930 286 aaKnown RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 ACRP10323 421 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PRDX3P30048 256 aaKnown RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CYP4F8P98187 520 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 TLE2Q04725 743 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 C18orf21Q32NC0 220 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CCDC92Q53HC0 331 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SATL1Q86VE3 508 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 FAM126BQ8IXS8 530 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 KYQ8NBH2 561 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SIDT2Q8NBJ9 832 aaKnown RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 WFDC5Q8TCV5 224 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PPP2R3CQ969Q6 453 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 GCNAQ96QF7 691 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 GPR21Q99679 349 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 PRKD2Q9BZL6 878 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CCDC68Q9H2F9 335 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 EBF3Q9H4W6 596 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 COPS7BQ9H9Q2 264 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-203ENST00000469739 WDR41Q9HAD4 459 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 CATSPERZQ9NTU4 200 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 SPATA7Q9P0W8 599 aa9.4□□□□□ -0.9
TOP3A-203ENST00000469739 AP3B1O00203 1094 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 NDUFS3O75489 264 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 STC2O76061 302 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 OR6B1O95007 311 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 PPARGP37231 505 aaPredicted RBP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 LEPRP48357 1165 aaKnown RBP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 PHEXP78562 749 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CREB5Q02930 508 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 MSLNQ13421 630 aaPredicted RBP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CEACAM7Q14002 265 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 MRPL58Q14197 206 aaKnown RBP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 BTG3Q14201 252 aaPredicted RBP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 FLOT2Q14254 428 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 SFT2D3Q587I9 215 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 ANKS3Q6ZW76 656 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 IFNEQ86WN2 208 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CAMK1DQ8IU85 385 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CNTN4Q8IWV2 1026 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 LRRC43Q8N309 656 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CLDN19Q8N6F1 224 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CALML6Q8TD86 181 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 LRCH3Q96II8 777 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 ACOX2Q99424 681 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CLSTN3Q9BQT9 956 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CORO1BQ9BR76 489 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 TNKS2Q9H2K2 1166 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 CAPN10Q9HC96 672 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 S100A14Q9HCY8 104 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 PTTG2Q9NZH5 202 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 MID2Q9UJV3 735 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 AGO1Q9UL18 857 aaKnown RBP9.4□□□□□ -0.91
TOP3A-203ENST00000469739 RAI2Q9Y5P3 530 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 GON4LQ3T8J9 2241 aa9.4□□□□□ -0.91
TOP3A-203ENST00000469739 MYOCOSA0A1B0GUC4 107 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 RGSL1A5PLK6 1076 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 NPEPPSL1A6NEC2 478 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 CAPN8A6NHC0 703 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 BTN3A1O00481 513 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 CRCPO75575 148 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 GUCA1CO95843 209 aa9.39□□□□□ -0.91
TOP3A-203ENST00000469739 APOA4P06727 396 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms