RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 USP49Q70CQ1 688 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 KCNK18Q7Z418 384 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 TMEM86AQ8N2M4 240 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 STKLD1Q8NE28 680 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 OR10T2Q8NGX3 314 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 PRCCQ92733 491 aaPredicted RBP4.92□□□□□ -1.62
VPS8-219ENST00000469479 HPS3Q969F9 1004 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 SPATA17Q96L03 361 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 ZNF560Q96MR9 790 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 XPO6Q96QU8 1125 aaKnown RBP4.92□□□□□ -1.62
VPS8-219ENST00000469479 SLC22A12Q96S37 553 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 CYP2S1Q96SQ9 504 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 ACBD6Q9BR61 282 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 SPRTNQ9H040 489 aaPredicted RBP4.92□□□□□ -1.62
VPS8-219ENST00000469479 POLR1BQ9H9Y6 1135 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 SERTAD4Q9NUC0 356 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 EHD3Q9NZN3 535 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 VSX1Q9NZR4 365 aaPredicted RBP4.92□□□□□ -1.62
VPS8-219ENST00000469479 WDR35Q9P2L0 1181 aa4.92□□□□□ -1.62
VPS8-219ENST00000469479 SPTBN1Q01082 2364 aaKnown RBP4.92□□□□□ -1.62
VPS8-219ENST00000469479 NF1P21359 2839 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 A0A1B0GTQ1 180 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 ANO9A1A5B4 782 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CLEC18AA5D8T8 446 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TISP43B9A030 160 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 PYCARD-AS1I3L0S3 204 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 MYO1FO00160 1098 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 NEMP1O14524 444 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CYB561D2O14569 222 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 VILLO15195 856 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CACNG3O60359 315 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TULP3O75386 442 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 OLFM2O95897 454 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 EDN1P05305 212 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 EBLN1P0CF75 366 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CXCL8P10145 99 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 MTHFD1P11586 935 aaKnown RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 CD27P26842 260 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 RPA1P27694 616 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 NPTX2P47972 431 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TAF6P49848 677 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TPMTP51580 245 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 ZNF134P52741 427 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 BCAT1P54687 386 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 POU5F1Q01860 360 aaKnown RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 ZBTB16Q05516 673 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 PRAMEF17Q5VTA0 474 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CLEC18BQ6UXF7 455 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TMPRSS9Q7Z410 1059 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 SPATA2LQ8IUW3 424 aaPredicted RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 CLEC18CQ8NCF0 446 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CLRN3Q8NCR9 226 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 NSUN7Q8NE18 718 aaKnown RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 UCMAQ8WVF2 138 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 SIPA1Q96FS4 1042 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 SLITRK1Q96PX8 696 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 NTPCRQ9BSD7 190 aaKnown RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 TTLL2Q9BWV7 592 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TRIM4Q9C037 500 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 QRSL1Q9H0R6 528 aaKnown RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 ASB7Q9H672 318 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 TM9SF3Q9HD45 589 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 SPHK2Q9NRA0 654 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CFAP97Q9P2B7 532 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.91□□□□□ -1.62
VPS8-219ENST00000469479 C2CD2Q9Y426 696 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 CPQQ9Y646 472 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 ANK1P16157 1881 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 RELNP78509 3460 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 PTPRDP23468 1912 aa4.91□□□□□ -1.62
VPS8-219ENST00000469479 MYO16Q9Y6X6 1858 aa4.9□□□□□ -1.62
VPS8-219ENST00000469479 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.62
VPS8-219ENST00000469479 ADAMTS9Q9P2N4 1935 aa4.9□□□□□ -1.62
VPS8-219ENST00000469479 CCDC187A0A096LP49 1063 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 KPNA7A9QM74 516 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 BTBD18B2RXH4 712 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 PRRT4C9JH25 899 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 PIRO00625 290 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 OGTO15294 1046 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ADRB2P07550 413 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 FAM163BP0C2L3 166 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 HARSP12081 509 aaKnown RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 ZFXP17010 805 aaPredicted RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 BPIP17213 487 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ACP1P24666 158 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ANXA13P27216 316 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 RBMS1P29558 406 aaKnown RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 MATR3P43243 847 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS8-219ENST00000469479 LHX1P48742 406 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 TUBP50607 506 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 PEX3P56589 373 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 EVCP57679 992 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 CTXN1P60606 82 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 NOP14P78316 857 aaKnown RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 GOLGA8FQ08AF8 430 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 GOLGA8DPQ0D2H9 430 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ORC2Q13416 577 aaPredicted RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 BMPR2Q13873 1038 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 TMEM132DQ14C87 1099 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 RABEP1Q15276 862 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms