RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 TUBA1CQ9BQE3 449 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 ZHX3Q9H4I2 956 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 DDX31Q9H8H2 851 aaKnown RBP3.15□□□□□ -1.91
TPR-204ENST00000469463 SEBOXQ9HB31 216 aaPredicted RBP3.15□□□□□ -1.91
TPR-204ENST00000469463 SCPEP1Q9HB40 452 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 RANGRFQ9HD47 186 aaPredicted RBP3.15□□□□□ -1.91
TPR-204ENST00000469463 DIAPH3Q9NSV4 1193 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 ACSS1Q9NUB1 689 aaPredicted RBP3.15□□□□□ -1.91
TPR-204ENST00000469463 POU2F3Q9UKI9 436 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 PADI1Q9ULC6 663 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 TAF1P21675 1872 aa3.15□□□□□ -1.91
TPR-204ENST00000469463 FAM237AA0A1B0GTK4 181 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 DVL1O14640 695 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 TGFB1I1O43294 461 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 PAGE4O60829 102 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 KCNK5O95279 499 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 CDH1P12830 882 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 POLR2CP19387 275 aaPredicted RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 TNFAIP3P21580 790 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 FMO5P49326 533 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 DVL1P1P54792 670 aaPredicted RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 GALCP54803 685 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 TAS2R38P59533 333 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 HILS1P60008 231 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ISL1P61371 349 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 MPP1Q00013 466 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 CSTF3Q12996 717 aaKnown RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 MAD2L1Q13257 205 aaPredicted RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 PDE1CQ14123 709 aaPredicted RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 NAB2Q15742 525 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 DCST1Q5T197 706 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 CCDC30Q5VVM6 783 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 WBP2NLQ6ICG8 309 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ZNF280DQ6N043 979 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 TTI2Q6NXR4 508 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 CYP20A1Q6UW02 462 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 CACNA2D4Q7Z3S7 1137 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ZNF329Q86UD4 541 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 WFIKKN2Q8TEU8 576 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 SLC20A1Q8WUM9 679 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 RFFLQ8WZ73 363 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 IGSF8Q969P0 613 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ARHGEF26Q96DR7 871 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 GRAMD2BQ96HH9 432 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 MPP4Q96JB8 637 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 C7orf26Q96N11 449 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ZNF583Q96ND8 569 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 WDFY2Q96P53 400 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 INPP4AQ96PE3 977 aaPredicted RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 CHMP4AQ9BY43 222 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 FTOQ9C0B1 505 aaKnown RBP eCLIP3.14□□□□□ -1.91
TPR-204ENST00000469463 CSTL1Q9H114 145 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 SH2D4AQ9H788 454 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 POLR1BQ9H9Y6 1135 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ZNF556Q9HAH1 456 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 ABCF3Q9NUQ8 709 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 MCM9Q9NXL9 1143 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 EHD2Q9NZN4 543 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 STK39Q9UEW8 545 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 CNOT8Q9UFF9 292 aaKnown RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 OR14J1Q9UGF5 321 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 PGAP2Q9UHJ9 254 aa3.14□□□□□ -1.91
TPR-204ENST00000469463 FAF1Q9UNN5 650 aaPredicted RBP3.14□□□□□ -1.91
TPR-204ENST00000469463 C16orf97H3BN30 126 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 XPNPEP2O43895 674 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 RNASEH2AO75792 299 aaKnown RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 DDNO94850 711 aaPredicted RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 F7P08709 466 aaPredicted RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 MYOD1P15172 320 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 ITGA2P17301 1181 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 CHMP24386 653 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 NR2F2P24468 414 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 CORO1AP31146 461 aaKnown RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 USP8P40818 1118 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 LRMPQ12912 555 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 DDX10Q13206 875 aaKnown RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 CDONQ4KMG0 1287 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 OTUD3Q5T2D3 398 aaPredicted RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 STPG1Q5TH74 334 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 FRG2Q64ET8 278 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 FBXL22Q6P050 247 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 FAM180BQ6P0A1 224 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 GDPD4Q6W3E5 623 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 TMTC3Q6ZXV5 915 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 PXKQ7Z7A4 578 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 TMPRSS12Q86WS5 348 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 TEX11Q8IYF3 940 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 ZNF34Q8IZ26 560 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 RNF113BQ8IZP6 322 aaKnown RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 NAGSQ8N159 534 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 TEX19Q8NA77 164 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 KBTBD3Q8NAB2 608 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 OR13A1Q8NGR1 328 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 SPATA22Q8NHS9 363 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 PPP4R1Q8TF05 950 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 TMEM255BQ8WV15 326 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 SORCS1Q8WY21 1168 aa3.13□□□□□ -1.91
TPR-204ENST00000469463 HDAC2Q92769 488 aaKnown RBP3.13□□□□□ -1.91
TPR-204ENST00000469463 CDCA5Q96FF9 252 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms