RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 UGT2B17O75795 530 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PDE9AO76083 593 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PROSCO94903 275 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ABLIM3O94929 683 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 GABARAPO95166 117 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 OR5F1O95221 314 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RASAL1O95294 804 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SNAPINO95295 136 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 OLFM2O95897 454 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 HPRP00739 348 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 HLA-DRAP01903 254 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 NR3C1P04150 777 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 KRT19P08727 400 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SLC2A3P11169 496 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 IL7P13232 177 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 IL1R1P14778 569 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RAB3AP20336 220 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 C4BPBP20851 252 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PRKCHP24723 683 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ARNTP27540 789 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 GABRB3P28472 473 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RPL9P32969 192 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ETV6P41212 452 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 BTDP43251 543 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RECQLP46063 649 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 NUDT2P50583 147 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ARSEP51690 589 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 NDST1P52848 882 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 UGT2B15P54855 530 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CSNK2BP67870 215 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 GALK2Q01415 458 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ITKQ08881 620 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RALGDSQ12967 914 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 GPS1Q13098 491 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 FADDQ13158 208 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 GRM4Q14833 912 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PUM3Q15397 648 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 FBXO43Q4G163 708 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SBK1Q52WX2 424 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PRR16Q569H4 304 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 DCAF17Q5H9S7 520 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 KCNT1Q5JUK3 1230 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 METTL24Q5JXM2 366 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SNAP47Q5SQN1 464 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 GARNL3Q5VVW2 1013 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PLA2G4FQ68DD2 849 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 LMBRD2Q68DH5 695 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SULT1C3Q6IMI6 304 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MOXD1Q6UVY6 613 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 EPGNQ6UW88 154 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RANBP10Q6VN20 620 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TMEM26Q6ZUK4 368 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 USP51Q70EK9 711 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SPRED1Q7Z699 444 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 OSTM1Q86WC4 334 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SNX32Q86XE0 403 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 LYSMD2Q8IV50 215 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 UBQLNLQ8IYU4 475 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TCTE3Q8IZS6 198 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 REXO1Q8N1G1 1221 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MFSD4AQ8N468 514 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CHCHD4Q8N4Q1 142 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 AMER2Q8N7J2 671 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF781Q8N8C0 355 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 KIAA1958Q8N8K9 716 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 POC5Q8NA72 575 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 FNDC5Q8NAU1 212 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TXNDC5Q8NBS9 432 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 HIPK4Q8NE63 616 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TTLQ8NG68 377 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 OR6F1Q8NGZ6 308 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ZFAND1Q8TCF1 268 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TFB1MQ8WVM0 346 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 HERVK_113Q902F9 699 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 FCGR1BQ92637 280 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TANKQ92844 425 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MYDGFQ969H8 173 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ROPN1LQ96C74 230 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 INTS12Q96CB8 462 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 AP2M1Q96CW1 435 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 AURKBQ96GD4 344 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 HRASLS5Q96KN8 279 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CLSTN3Q9BQT9 956 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PELOQ9BRX2 385 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 SARGQ9BW04 601 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TARS2Q9BW92 718 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 INTS2Q9H0H0 1204 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 WDR41Q9HAD4 459 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CYP4F11Q9HBI6 524 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TUFT1Q9NNX1 390 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CCNB1IP1Q9NPC3 277 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CD93Q9NPY3 652 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 WASH6PQ9NQA3 447 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CHST7Q9NS84 486 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CCM2LQ9NUG4 571 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 INTS10Q9NVR2 710 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RAB20Q9NX57 234 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ING3Q9NXR8 418 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms