RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GON4LQ3T8J9 2241 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 THADAQ6YHU6 1953 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 CHD8Q9HCK8 2581 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 GLYATL1P3A0A0U1RQE8 302 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 CCDC151A5D8V7 595 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 SRP72O76094 671 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 OGNP20774 298 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 BCKDHBP21953 392 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 NMBRP28336 390 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 FOXN2P32314 431 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 PXNP49023 591 aaPredicted RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 ARSDP51689 593 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 KIAA1024LP59773 190 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 CACNG1Q06432 222 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 NFATC2Q13469 925 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 HLTFQ14527 1009 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSH5-214ENST00000468602 ITIH4Q14624 930 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 FASTKD3Q14CZ7 662 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 BRD3Q15059 726 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 ACOX1Q15067 660 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 LONRF1Q17RB8 773 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 TYSND1Q2T9J0 566 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 BBS9Q3SYG4 887 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 LRRC73Q5JTD7 316 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 LYPLAL1Q5VWZ2 237 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 KIAA0408Q6ZU52 694 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 RABEPKQ7Z6M1 372 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 FAM124AQ86V42 546 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 CACUL1Q86Y37 369 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 ZBED8Q8IZ13 594 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 FAM160A2Q8N612 972 aaPredicted RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 PAF1Q8N7H5 531 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 FRMD1Q8N878 549 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 MFSD2AQ8NA29 543 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSH5-214ENST00000468602 DDHD1Q8NEL9 900 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 CALML6Q8TD86 181 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 PYROXD1Q8WU10 500 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 ULK4Q96C45 1275 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 AP2M1Q96CW1 435 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 MFSD3Q96ES6 412 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 TBATAQ96M53 351 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 PWWP2AQ96N64 755 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 MCMBPQ9BTE3 642 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 WRAP53Q9BUR4 548 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 LRRC4CQ9HCJ2 640 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 SAYSD1Q9NPB0 183 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 PIH1D1Q9NWS0 290 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 CNOT6Q9ULM6 557 aaKnown RBP11.21□□□□□ -0.61
MSH5-214ENST00000468602 PCDHGA5Q9Y5G8 931 aa11.21□□□□□ -0.61
MSH5-214ENST00000468602 PLXNB3Q9ULL4 1909 aa11.21□□□□□ -0.62
MSH5-214ENST00000468602 A0A1W2PR77 199 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 PRR5-ARHGAP8B1AHC4 643 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 TNFRSF10CO14798 259 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 PAK4O96013 591 aaPredicted RBP11.2□□□□□ -0.62
MSH5-214ENST00000468602 CD9P21926 228 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 AKT2P31751 481 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 RABIFP47224 123 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 GPX6P59796 221 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 CRADDP78560 199 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 TCF15Q12870 199 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 NAB1Q13506 487 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 ELF2Q15723 593 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 AARS2Q5JTZ9 985 aaKnown RBP11.2□□□□□ -0.62
MSH5-214ENST00000468602 PACS1Q6VY07 963 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 GCNT7Q6ZNI0 430 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 OR4L1Q8NH43 312 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 GABPB2Q8TAK5 448 aaPredicted RBP11.2□□□□□ -0.62
MSH5-214ENST00000468602 ZNF398Q8TD17 642 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 BTN2A2Q8WVV5 523 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 HDAC10Q969S8 669 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 ERLEC1Q96DZ1 483 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 CERS2Q96G23 380 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 BMFQ96LC9 184 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 VPS18Q9P253 973 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 SLC2A6Q9UGQ3 507 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 SUSD2Q9UGT4 822 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 PILRBQ9UKJ0 227 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 TMPRSS11EQ9UL52 423 aa11.2□□□□□ -0.62
MSH5-214ENST00000468602 A0A0U1RQS6 177 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 CCDC162PA2VCL2 907 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 FAM159BA6NKW6 160 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 FPGTO14772 594 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 RAD51BO15315 384 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 MAP3K13O43283 966 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 TCEA3O75764 348 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 ITGALP20701 1170 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 RPS3P23396 243 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSH5-214ENST00000468602 IGFALSP35858 605 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 PPARGP37231 505 aaPredicted RBP11.19□□□□□ -0.62
MSH5-214ENST00000468602 NBL1P41271 181 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 LEPRP48357 1165 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms