RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ARL8AQ96BM9 186 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 DTD2Q96FN9 168 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 ERP44Q9BS26 406 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 TRIM51Q9BSJ1 452 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 DNPEPQ9ULA0 475 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 RPL26L1Q9UNX3 145 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 WDFY3Q8IZQ1 3526 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 RP1P56715 2156 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 LY6G6EA0A0G2JKS1 128 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 A0A0J9YYE9 177 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 LMO7DNF2Z398 122 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 KCNK1O00180 336 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 SHOX2O60902 331 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 JCHAINP01591 159 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 TRBC1P01850 177 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 GP1BAP07359 652 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 KELP23276 732 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 HSD17B3P37058 310 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 NR2C2P49116 596 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 SRP54P61011 504 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 NIPAL4Q0D2K0 466 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 AP1B1Q10567 949 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 ALG11Q2TAA5 492 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 PRRT3Q5FWE3 981 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 PNCKQ6P2M8 343 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 SDR16C5Q8N3Y7 309 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 ZCCHC14Q8WYQ9 949 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 MAGOHBQ96A72 148 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 FUBP1Q96AE4 644 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 SLC24A3Q9HC58 644 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 KLQ9UEF7 1012 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 DGKBQ9Y6T7 804 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 U3KQA8 63 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 ZFC3H1O60293 1989 aaKnown RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 ARHGEF17Q96PE2 2063 aaPredicted RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 HMGB1P1B2RPK0 211 aaPredicted RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 GCATO75600 419 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 KRT14P02533 472 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 PYGMP11217 842 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 TSHRP16473 764 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 ZNF30P17039 623 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 TGM2P21980 687 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 TEAD1P28347 426 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 DRG2P55039 364 aaKnown RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 ZBTB17Q13105 803 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 ELOCQ15369 112 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 DEFB133Q30KQ1 61 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 HES3Q5TGS1 186 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 DUPD1Q68J44 220 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 NPNTQ6UXI9 565 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 HSD11B1LQ7Z5J1 315 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 SLC13A5Q86YT5 568 aaPredicted RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 JAMLQ86YT9 394 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 HID1Q8IV36 788 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 RAVER1Q8IY67 606 aaKnown RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 CNTD1Q8N815 330 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 WDR26Q9H7D7 661 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 PCDH9Q9HC56 1237 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 PCYOX1Q9UHG3 505 aa14.44□□□□□ -0.1
COL27A1-203ENST00000468565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 COL27A1Q8IZC6 1860 aaPredicted RBP14.44□□□□□ -0.1
COL27A1-203ENST00000468565 CAPN8A6NHC0 703 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 TNFRSF10CO14798 259 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 PRLP01236 227 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CAPNS1P04632 268 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 ANXA6P08133 673 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 MMP2P08253 660 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 ALPIP09923 528 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CTPS1P17812 591 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 ETV3P41162 512 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 EPHB1P54762 984 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 DYNLT1P63172 113 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 SKOR1P84550 965 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 C1orf61Q13536 156 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CYP1B1Q16678 543 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CEP85LQ5SZL2 805 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 C6orf132Q5T0Z8 1188 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 AADACL2Q6P093 401 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 TSPAN33Q86UF1 283 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 RCOR2Q8IZ40 523 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL27A1-203ENST00000468565 PRELID2Q8N945 189 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 OR56A4Q8NGH8 313 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 EXD1Q8NHP7 514 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 UBLCP1Q8WVY7 318 aaPredicted RBP14.43□□□□□ -0.1
COL27A1-203ENST00000468565 GLMNQ92990 594 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 TSACCQ96A04 125 aaPredicted RBP14.43□□□□□ -0.1
COL27A1-203ENST00000468565 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
COL27A1-203ENST00000468565 LYSMD1Q96S90 227 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 FMO2Q99518 471 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 BOCQ9BWV1 1114 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CAPS2Q9BXY5 557 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CLPBQ9H078 707 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 ZMIZ1Q9ULJ6 1067 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 CHKBQ9Y259 395 aa14.43□□□□□ -0.1
COL27A1-203ENST00000468565 FAM149AA5PLN7 773 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms