RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 LRRC45Q96CN5 670 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 SCARF2Q96GP6 870 aaPredicted RBP10.99□□□□□ -0.65
MSH5-212ENST00000467319 CAPZA3Q96KX2 299 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 ZSCAN5AQ9BUG6 496 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 TCEAL2Q9H3H9 227 aaPredicted RBP10.99□□□□□ -0.65
MSH5-212ENST00000467319 IL26Q9NPH9 171 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 CASS4Q9NQ75 786 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 SMOXQ9NWM0 555 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 UCKL1Q9NWZ5 548 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 DNAJC28Q9NX36 388 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 RNF14Q9UBS8 474 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 PCYOX1Q9UHG3 505 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 PCOLCE2Q9UKZ9 415 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 ARL5AQ9Y689 179 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
MSH5-212ENST00000467319 ARID1BQ8NFD5 2236 aaPredicted RBP10.99□□□□□ -0.65
MSH5-212ENST00000467319 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 PRSS38A1L453 326 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 H3BM21 787 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 SDC3O75056 442 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 CEACAM5P06731 702 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 IVLP07476 585 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 JUNDP17535 347 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 TPSB2P20231 275 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 DGKAP23743 735 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 SPAM1P38567 509 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 GRIA1P42261 906 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 PTGIRP43119 386 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 GPR1P46091 355 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 HK3P52790 923 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 CDK16Q00536 496 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 CDH17Q12864 832 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 TPSAB1Q15661 275 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 KCTD19Q17RG1 926 aaPredicted RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 INAVAQ3KP66 663 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 ZNF542PQ5EBM4 170 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 ZDHHC20Q5W0Z9 365 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 ALS2CLQ60I27 953 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 ZNF572Q7Z3I7 529 aaPredicted RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 TRIM74Q86UV6 250 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 OR52K1Q8NGK4 314 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 HIC2Q96JB3 615 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 C16orf45Q96MC5 204 aaPredicted RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 VPS35Q96QK1 796 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 DDX47Q9H0S4 455 aaKnown RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.98□□□□□ -0.65
MSH5-212ENST00000467319 VPS18Q9P253 973 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 KLQ9UEF7 1012 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 APOBEC3BQ9UH17 382 aaKnown RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 TMPRSS11EQ9UL52 423 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 OAS3Q9Y6K5 1087 aaKnown RBP10.98□□□□□ -0.65
MSH5-212ENST00000467319 CSNK1G3Q9Y6M4 447 aa10.98□□□□□ -0.65
MSH5-212ENST00000467319 PLXNB3Q9ULL4 1909 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 C2orf81A6NN90 581 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 E7EVH7 732 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 GPR39O43194 453 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 BUD23O43709 281 aaKnown RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 SH3BP5O60239 455 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 TMEM63AO94886 807 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 RASGRP1O95267 797 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 ECEL1O95672 775 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 CRTAMO95727 393 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 GAS8O95995 478 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 KRT14P02533 472 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 FUCA1P04066 466 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 LPOP22079 712 aaPredicted RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 CASQ1P31415 396 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 ID4P47928 161 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 BLKP51451 505 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 SRP54P61011 504 aaKnown RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 BASP1P80723 227 aaKnown RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 XIAPP98170 497 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 PDE1BQ01064 536 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 PPARDQ03181 441 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 BNIP3Q12983 259 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 GPS1Q13098 491 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 PTK6Q13882 451 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 PTPRCAPQ14761 206 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 POU6F1Q14863 301 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 TRIP13Q15645 432 aaPredicted RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 GLRX5Q86SX6 157 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 PHYKPLQ8IUZ5 450 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 DEFB124Q8NES8 71 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 GRK7Q8WTQ7 553 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 BTN2A2Q8WVV5 523 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 CPT1BQ92523 772 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 GLYATL1Q969I3 302 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 TSACCQ96A04 125 aaPredicted RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 CAMK1GQ96NX5 476 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 RANBP9Q96S59 729 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 CLPBQ9H078 707 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 BPIFA1Q9NP55 256 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 PIH1D1Q9NWS0 290 aaKnown RBP10.97□□□□□ -0.65
MSH5-212ENST00000467319 PKP3Q9Y446 797 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 KCTD3Q9Y597 815 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 CEP295Q9C0D2 2601 aa10.97□□□□□ -0.65
MSH5-212ENST00000467319 GLYATL1P3A0A0U1RQE8 302 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms