RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 GEN1Q17RS7 908 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 CCNYL2Q5T2Q4 361 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC15A4Q8N697 577 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 DNAJB3Q8WWF6 145 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 PPP1R10Q96QC0 940 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 ATP13A1Q9HD20 1204 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 PFDN4Q9NQP4 134 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 INTS10Q9NVR2 710 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 TMEM9Q9P0T7 183 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 ANAPC2Q9UJX6 822 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 RRN3P2A6NIE6 340 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC4A1P02730 911 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC26A3P40879 764 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 MLLT10P55197 1068 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 NFYCQ13952 458 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 PCBP1Q15365 356 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 PAGE3Q5JUK9 113 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 ZNF549Q6P9A3 640 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 RYBPQ8N488 228 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 CNDP2Q96KP4 475 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 TUBA1CQ9BQE3 449 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 YTHDF1Q9BYJ9 559 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 TRIM54Q9BYV2 358 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 ZFYVE28Q9HCC9 887 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 PKD2L2Q9NZM6 624 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SELENONQ9NZV5 590 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 KCTD3Q9Y597 815 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 GPR45Q9Y5Y3 372 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 MIA3Q5JRA6 1907 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SOBPA7XYQ1 873 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 CES1P23141 567 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 GJA5P36382 358 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 BCAP31P51572 246 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 ATP1A4Q13733 1029 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 PDCD4Q53EL6 469 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 COQ5Q5HYK3 327 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 AFMIDQ63HM1 303 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 C16orf87Q6PH81 154 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 ZNF773Q6PK81 442 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 GALNT7Q86SF2 657 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 RNF168Q8IYW5 571 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 TBC1D21Q8IYX1 336 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SMARCD1Q96GM5 515 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 TMEM74Q96NL1 305 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 MUS81Q96NY9 551 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 PPP1R2P1Q96PQ5 205 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 KCTD14Q9BQ13 255 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 MTG1Q9BT17 334 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 ARMC7Q9H6L4 198 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 FANCEQ9HB96 536 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 RGS18Q9NS28 235 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SLAMF8Q9P0V8 285 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 V9GYQ6 96 aa12.95□□□□□ -0.34
PDZRN3-205ENST00000466780 SMIM35A0A1B0GVV1 85 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 A0A1W2PP18 115 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC7A4O43246 635 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 KPNA6O60684 536 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SULT1C4O75897 302 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 PEX11BO96011 259 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 LDLRP01130 860 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 CCNA2P20248 432 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 HRH2P25021 359 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 CYP2C18P33260 490 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SHMT2P34897 504 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 MAXP61244 160 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 CDC42EP1Q00587 391 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 ECT2LQ008S8 904 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SPIDRQ14159 915 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 RPS6KA2Q15349 733 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 PFKFB4Q16877 469 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 FUT11Q495W5 492 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 C3orf58Q8NDZ4 430 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SNX19Q92543 992 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 FCRL2Q96LA5 508 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 CSF3RQ99062 836 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SLC25A51Q9H1U9 297 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 MFSD1Q9H3U5 465 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 CSNK1G1Q9HCP0 422 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 MPP6Q9NZW5 540 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 PAIP2BQ9ULR5 123 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 MROH6A6NGR9 719 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 FGF10O15520 208 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 IRAK2O43187 625 aa12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 MSI1O43347 362 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-205ENST00000466780 SEC14L2O76054 403 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms