RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 KCTD18Q6PI47 426 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-211ENST00000466054 CCDC34Q96HJ3 373 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 ACOX2Q99424 681 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 BARD1Q99728 777 aaKnown RBP4.29□□□□□ -1.72
LRCH3-211ENST00000466054 KCNN2Q9H2S1 579 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 MMP25Q9NPA2 562 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 MAP3K20Q9NYL2 800 aaKnown RBP4.29□□□□□ -1.72
LRCH3-211ENST00000466054 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
LRCH3-211ENST00000466054 SESN1Q9Y6P5 492 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 PLRG1O43660 514 aaKnown RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 OR2C1O95371 312 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 ACAA1P09110 424 aaPredicted RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 G6PDP11413 515 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 ALOX12P18054 663 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 UBA1P22314 1058 aaKnown RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 EIF2S3P41091 472 aaKnown RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 PIK3CAP42336 1068 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 PRCPP42785 496 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 PEX5P50542 639 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 MRPS34P82930 218 aaKnown RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 BNC1Q01954 994 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 LRMPQ12912 555 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 NAB2Q15742 525 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 CTF1Q16619 201 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 IZUMO4Q1ZYL8 232 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 XKR9Q5GH70 373 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 WDR78Q5VTH9 848 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 FAM205BPQ63HN1 556 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 FRG2Q64ET8 278 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 HIST2H2BCQ6DN03 193 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 HIST2H2BDQ6DRA6 164 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 BRINP3Q76B58 766 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 FASTKD5Q7L8L6 764 aaKnown RBP4.28□□□□□ -1.72
LRCH3-211ENST00000466054 CCDC13Q8IYE1 715 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 ADGRF2Q8IZF7 708 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 TTC39CQ8N584 583 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 WDTC1Q8N5D0 677 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 OR14L1PQ8NHC6 308 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 MTBPQ96DY7 904 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 GHITMQ9H3K2 345 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 MAGIXQ9H6Y5 334 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 SLC28A3Q9HAS3 691 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 PCDH9Q9HC56 1237 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 CD93Q9NPY3 652 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 NSMCE4AQ9NXX6 385 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 SLC9A2Q9UBY0 812 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 ACSL5Q9ULC5 683 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 NFS1Q9Y697 457 aa4.28□□□□□ -1.72
LRCH3-211ENST00000466054 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 hDV102S1A0JD36 115 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 A6NCN8 305 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 PTGES3LE9PB15 166 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 SOCS6O14544 535 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 VILLO15195 856 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 LDB3O75112 727 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 RFPL2O75678 378 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 ACTN1P12814 892 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 HOXD13P35453 343 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 HNRNPH2P55795 449 aaKnown RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 TUBA1BP68363 451 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 CSNK2A1P68400 391 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 DHX34Q14147 1143 aaKnown RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 OASLQ15646 514 aaKnown RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 CALCRLQ16602 461 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 MEA1Q16626 185 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 EIF2S3LQ2VIR3 472 aaKnown RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 GKAP1Q5VSY0 366 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 ACSM2BQ68CK6 577 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 KRBA2Q6ZNG9 492 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 FOXRED2Q8IWF2 684 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 TEX11Q8IYF3 940 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 CSNK2A3Q8NEV1 391 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 NSUN4Q96CB9 384 aaKnown RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 OR1F2PQ96R84 312 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 SDF4Q9BRK5 362 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 TM6SF1Q9BZW5 370 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 ACSS1Q9NUB1 689 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-211ENST00000466054 MCM9Q9NXL9 1143 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 TINAGQ9UJW2 476 aa4.27□□□□□ -1.73
LRCH3-211ENST00000466054 CDRT15L2A8MXV6 281 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 HIST1H2ABP04908 130 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 DAOP14920 347 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF12P17014 697 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 HIST1H2ADP20671 130 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 MCM3P25205 808 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 ITGB8P26012 769 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 CLCN3P51790 818 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 CLCNKAP51800 687 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 GALCP54803 685 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 CDH8P55286 799 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 TAS2R40P59535 323 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 FOXM1Q08050 763 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 PDE1CQ14123 709 aaPredicted RBP4.26□□□□□ -1.73
LRCH3-211ENST00000466054 ZSCAN23Q3MJ62 389 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 DUSP28Q4G0W2 176 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 DCST1Q5T197 706 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 SLC36A4Q6YBV0 504 aa4.26□□□□□ -1.73
LRCH3-211ENST00000466054 CREB3L2Q70SY1 520 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms