RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TEKT5Q96M29 485 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 TRNAU1APQ9NX07 287 aaKnown RBP21.66■■□□□ 1.06
LIME1-203ENST00000465591 UBP1Q9NZI7 540 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 TAAR2Q9P1P5 351 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 OAS3Q9Y6K5 1087 aaKnown RBP21.66■■□□□ 1.06
LIME1-203ENST00000465591 RNF215Q9Y6U7 377 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 FGF1P05230 155 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 RPLP0P05388 317 aaKnown RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 ITPKBP27987 946 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 LSSP48449 732 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 MAZP56270 477 aaKnown RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 CTBSQ01459 385 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 SPIDRQ14159 915 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 C3orf38Q5JPI3 329 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 HENMT1Q5T8I9 393 aaKnown RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 MARK2Q7KZI7 788 aaKnown RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 C17orf82Q86X59 251 aaPredicted RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 CCDC50Q8IVM0 306 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 SNIP1Q8TAD8 396 aaKnown RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 PATE1Q8WXA2 126 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 PRR11Q96HE9 360 aaPredicted RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 HIC2Q96JB3 615 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 HEMGNQ9BXL5 484 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 ADGRE3Q9BY15 652 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 GSDMCQ9BYG8 508 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 POLR1BQ9H9Y6 1135 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 LUC7LQ9NQ29 371 aaKnown RBP21.65■■□□□ 1.06
LIME1-203ENST00000465591 SATB2Q9UPW6 733 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 SHOC2Q9UQ13 582 aa21.65■■□□□ 1.06
LIME1-203ENST00000465591 A0A0U1RQJ8 604 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 F5H423 210 aaPredicted RBP21.64■■□□□ 1.05
LIME1-203ENST00000465591 PMPCBO75439 489 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 ATP1A1P05023 1023 aaKnown RBP21.64■■□□□ 1.05
LIME1-203ENST00000465591 GLB1P16278 677 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 CDK18Q07002 472 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 ILF3Q12906 894 aaKnown RBP eCLIP21.64■■□□□ 1.05
LIME1-203ENST00000465591 SLC14A2Q15849 920 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 SLC30A9Q6PML9 568 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 RAVER1Q8IY67 606 aaKnown RBP21.64■■□□□ 1.05
LIME1-203ENST00000465591 Q8N9G6 341 aaPredicted RBP21.64■■□□□ 1.05
LIME1-203ENST00000465591 P3H4Q92791 437 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 FGF11Q92914 225 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 LRRN3Q9H3W5 708 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 FAM83DQ9H4H8 585 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 C10orf88Q9H8K7 445 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 ASCL3Q9NQ33 180 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 APPL1Q9UKG1 709 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 SPO11Q9Y5K1 396 aa21.64■■□□□ 1.05
LIME1-203ENST00000465591 D6RAR5 112 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 DXOO77932 396 aaKnown RBP21.63■■□□□ 1.05
LIME1-203ENST00000465591 NFKB1P19838 968 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 CTNNA1P35221 906 aaKnown RBP21.63■■□□□ 1.05
LIME1-203ENST00000465591 NOMO1Q15155 1222 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 PPP2R5EQ16537 467 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 PYCR3Q53H96 274 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 KDELC1Q6UW63 502 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 BBS12Q6ZW61 710 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 BZW1Q7L1Q6 419 aaKnown RBP21.63■■□□□ 1.05
LIME1-203ENST00000465591 CCNJLQ8IV13 435 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 OR6C4Q8NGE1 309 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 WDR48Q8TAF3 677 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 ZDHHC1Q8WTX9 485 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 RBM41Q96IZ5 413 aaKnown RBP21.63■■□□□ 1.05
LIME1-203ENST00000465591 QKIQ96PU8 341 aaKnown RBP eCLIP21.63■■□□□ 1.05
LIME1-203ENST00000465591 OR2M4Q96R27 311 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 ZFYVE1Q9HBF4 777 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 PKD2L2Q9NZM6 624 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 LRIT1Q9P2V4 623 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 ATXN7L1Q9ULK2 861 aaPredicted RBP21.63■■□□□ 1.05
LIME1-203ENST00000465591 ZNF711Q9Y462 761 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 PCDHA3Q9Y5H8 950 aa21.63■■□□□ 1.05
LIME1-203ENST00000465591 BTNL10A8MVZ5 291 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 PJA2O43164 708 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 DNAJC6O75061 913 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 SLC4A1P02730 911 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 PYGLP06737 847 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 ACTN2P35609 894 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 VAV2P52735 878 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 AADACL2Q6P093 401 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 TMPRSS9Q7Z410 1059 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 TMC3Q7Z5M5 1100 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 SPRED1Q7Z699 444 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 NAGSQ8N159 534 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 ZNF567Q8N184 647 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 LRRC57Q8N9N7 239 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 GPR26Q8NDV2 337 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 CCHCR1Q8TD31 782 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 OXNAD1Q96HP4 312 aaPredicted RBP21.62■■□□□ 1.05
LIME1-203ENST00000465591 GFM1Q96RP9 751 aaKnown RBP21.62■■□□□ 1.05
LIME1-203ENST00000465591 FOXP3Q9BZS1 431 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 MAGEE1Q9HCI5 957 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.62■■□□□ 1.05
LIME1-203ENST00000465591 PRKAB1Q9Y478 270 aa21.62■■□□□ 1.05
LIME1-203ENST00000465591 GRID2IPA4D2P6 1211 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 AURKAO14965 403 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ASMTLO95671 621 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ECEL1O95672 775 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 NDST3O95803 873 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ACTR1BP42025 376 aa21.61■■□□□ 1.05
LIME1-203ENST00000465591 ACTR1AP61163 376 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms