RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 INPP4BO15327 924 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 BUD23O43709 281 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 CBFA2T3O75081 653 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 PHF2O75151 1096 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 PPFIA2O75334 1257 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 SUN1O94901 812 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 RASGRP1O95267 797 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 KCNK5O95279 499 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 CRTAMO95727 393 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 TNFP01375 233 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 KRT14P02533 472 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 APRTP07741 180 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 CEACAM1P13688 526 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 TPH1P17752 444 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 LPOP22079 712 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 PAFAH1B1P43034 410 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 FNTAP49354 379 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 TRIP13Q15645 432 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 NYAP1Q6ZVC0 841 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 RBFAQ8N0V3 343 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 TRAM1L1Q8N609 369 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 TRIM44Q96DX7 344 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 PLEKHG4BQ96PX9 1271 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 ZSCAN5AQ9BUG6 496 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 TCEAL2Q9H3H9 227 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 FGF22Q9HCT0 170 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 MRPL40Q9NQ50 206 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 SPASTQ9UBP0 616 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 RNF14Q9UBS8 474 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 APOBEC3BQ9UH17 382 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 CNOT6Q9ULM6 557 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 DGKBQ9Y6T7 804 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 STX7O15400 261 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 AQP9O43315 295 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 CEACAM5P06731 702 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 CTSEP14091 401 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 SPAM1P38567 509 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 NOVA1P51513 510 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 BASP1P80723 227 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PDE1BQ01064 536 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 CDH17Q12864 832 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PTPRCAPQ14761 206 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 KCTD19Q17RG1 926 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PRRT3Q5FWE3 981 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PDPK2PQ6A1A2 396 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PSAPL1Q6NUJ1 521 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 SYT10Q6XYQ8 523 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PPP1R21Q6ZMI0 780 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 DGLUCYQ7Z3D6 616 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 EID2Q8N6I1 236 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 DNAAF3Q8N9W5 541 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 ZNF548Q8NEK5 533 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 OR52K1Q8NGK4 314 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 LMX1AQ8TE12 382 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 GRK7Q8WTQ7 553 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 OR1E3Q8WZA6 343 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PDXPQ96GD0 296 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 COX14Q96I36 57 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 TBATAQ96M53 351 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 CDC6Q99741 560 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 FRMD8Q9BZ67 464 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 CYP4F12Q9HCS2 524 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 IL26Q9NPH9 171 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 PIH1D1Q9NWS0 290 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 MOSPD1Q9UJG1 213 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 CSNK1G3Q9Y6M4 447 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 SCN8AQ9UQD0 1980 aa14.42□□□□□ -0.1
SQSTM1-205ENST00000464493 ARID1BQ8NFD5 2236 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 PRSS38A1L453 326 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 GIPC1O14908 333 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 SCAMP1O15126 338 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 LDB2O43679 373 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 GAS8O95995 478 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 GRIA1P42261 906 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 POLD2P49005 469 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 VPS41P49754 854 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 GPS1Q13098 491 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 C1orf61Q13536 156 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 TRIP6Q15654 476 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 PPM1JQ5JR12 505 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 KCTD16Q68DU8 428 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 DOK6Q6PKX4 331 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 TRIM74Q86UV6 250 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 OR4K2Q8NGD2 314 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 BAHD1Q8TBE0 780 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 DTX3LQ8TDB6 740 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 LRRC61Q9BV99 259 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 DDX47Q9H0S4 455 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 EIF2B3Q9NR50 452 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 SLC17A4Q9Y2C5 497 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 TMEM98Q9Y2Y6 226 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 NEU2Q9Y3R4 380 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 KCTD3Q9Y597 815 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 LRP4O75096 1905 aa14.41□□□□□ -0.1
SQSTM1-205ENST00000464493 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 GLYATL1P3A0A0U1RQE8 302 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 TRIM38O00635 465 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 FFAR2O15552 330 aa14.4□□□□□ -0.1
SQSTM1-205ENST00000464493 SLC25A14O95258 325 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms