RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CRY1Q16526 586 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CLPPQ16740 277 aaPredicted RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CA9Q16790 459 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CYP51A1Q16850 503 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 FAM98BQ52LJ0 330 aaKnown RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 C6orf10Q5SRN2 563 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 KCTD11Q693B1 232 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 KIAA0930Q6ICG6 404 aaPredicted RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 JADE1Q6IE81 842 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 HMBOX1Q6NT76 420 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 TRNP1Q6NT89 227 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 GALNT18Q6P9A2 607 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 PAOXQ6QHF9 649 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CUZD1Q86UP6 607 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC51AQ86UW1 340 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 AMIGO3Q86WK7 504 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 GALNT13Q8IUC8 556 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 LRRC49Q8IUZ0 686 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 LSMEM2Q8N112 164 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 ZCCHC7Q8N3Z6 543 aaKnown RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 KCTD4Q8WVF5 259 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CANT1Q8WVQ1 401 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 RASSF5Q8WWW0 418 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 L3HYPDHQ96EM0 354 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 C19orf60Q96EN9 201 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 GLT1D1Q96MS3 346 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 FCRL3Q96P31 734 aaPredicted RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 TSGA13Q96PP4 275 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 TWNKQ96RR1 684 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 LGMNQ99538 433 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 APBA2Q99767 749 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 KCTD14Q9BQ13 255 aaPredicted RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 MTG1Q9BT17 334 aaPredicted RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 HGH1Q9BTY7 390 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 NUSAP1Q9BXS6 441 aaKnown RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 PCDHAC1Q9H158 963 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 PRDM12Q9H4Q4 367 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 POPDC3Q9HBV1 291 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 ZFYVE28Q9HCC9 887 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CCNB1IP1Q9NPC3 277 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 ENTPD7Q9NQZ7 604 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CCDC167Q9P0B6 97 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 ANKMY1Q9P2S6 941 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 WARS2Q9UGM6 360 aaKnown RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 SUN2Q9UH99 717 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF639Q9UID6 485 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 LEF1Q9UJU2 399 aaPredicted RBP7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 PCDHGB4Q9UN71 923 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CDC14AQ9UNH5 594 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 PCDHGB5Q9Y5G0 923 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 SNX9Q9Y5X1 595 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CPQQ9Y646 472 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 CROCCQ5TZA2 2017 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 COL1A2P08123 1366 aa7.18□□□□□ -1.26
CLSTN1-204ENST00000464286 RALGAPA2Q2PPJ7 1873 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 FNDC1Q4ZHG4 1894 aaPredicted RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 PTPRFP10586 1907 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 DICER1Q9UPY3 1922 aaKnown RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 A0A0J9YYE9 177 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 MYOCOSA0A1B0GUC4 107 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 AQP9O43315 295 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CRCPO75575 148 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 FARP2O94887 1054 aaPredicted RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 AMHP03971 560 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 FUCA1P04066 466 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 PFKMP08237 780 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 THRBP10828 461 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CDH1P12830 882 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CPB1P15086 417 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CKMT2P17540 419 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 ITIH1P19827 911 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 HTR1EP28566 365 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CD40LGP29965 261 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 MSX2P35548 267 aaPredicted RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 GATA4P43694 442 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 GSSP48637 474 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 KRT6CP48668 564 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 RAD23AP54725 363 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 DEFA1P59665 94 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 DEFA3P59666 94 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CSNK2BP67870 215 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 TUBA1BP68363 451 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 ADARB1P78563 741 aaKnown RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 IRF9Q00978 393 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CHRNB3Q05901 458 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 MBTD1Q05BQ5 628 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 CDC20Q12834 499 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 DAG1Q14118 895 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 DOC2BQ14184 412 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 NEDD8Q15843 81 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 FGD3Q5JSP0 725 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 COX20Q5RI15 118 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 SLX4IPQ5VYV7 408 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 TMEM198Q66K66 360 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 NANOGP8Q6NSW7 305 aa7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 TIGD7Q6NT04 549 aaPredicted RBP7.17□□□□□ -1.26
CLSTN1-204ENST00000464286 PMF1Q6P1K2 205 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms