RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 MARK2Q7KZI7 788 aaKnown RBP22.49■■□□□ 1.19
USP4-208ENST00000464168 NLRP8Q86W28 1048 aa22.49■■□□□ 1.19
USP4-208ENST00000464168 TRIM11Q96F44 468 aa22.49■■□□□ 1.19
USP4-208ENST00000464168 AGAP2Q99490 1192 aa22.49■■□□□ 1.19
USP4-208ENST00000464168 ASPSCR1Q9BZE9 553 aa22.49■■□□□ 1.19
USP4-208ENST00000464168 ADNPQ9H2P0 1102 aa22.49■■□□□ 1.19
USP4-208ENST00000464168 PCDH18Q9HCL0 1135 aa22.49■■□□□ 1.19
USP4-208ENST00000464168 EML2O95834 649 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 SKILP12757 684 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 ZNF765Q7L2R6 523 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 ZNF761Q86XN6 746 aaPredicted RBP22.48■■□□□ 1.19
USP4-208ENST00000464168 CACNA2D3Q8IZS8 1091 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 SFRP1Q8N474 314 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 BMPERQ8N8U9 685 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 SLC37A2Q8TED4 501 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 TEKT4Q8WW24 435 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 COX14Q96I36 57 aa22.48■■□□□ 1.19
USP4-208ENST00000464168 A0A0J9YYE9 177 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 EFCAB7A8K855 629 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 TRBC1P01850 177 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 IL4RP24394 825 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 SERPINB6P35237 376 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 STC1P52823 247 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 LRP8Q14114 963 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.47■■□□□ 1.19
USP4-208ENST00000464168 DCAF12Q5T6F0 453 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 ANKS6Q68DC2 871 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 FAM129CQ86XR2 697 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 GALNT13Q8IUC8 556 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 LRRC49Q8IUZ0 686 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 NDUFAF2Q8N183 169 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 RIOK2Q9BVS4 552 aaKnown RBP22.47■■□□□ 1.19
USP4-208ENST00000464168 SPRY4Q9C004 299 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 PILRAQ9UKJ1 303 aa22.47■■□□□ 1.19
USP4-208ENST00000464168 PCYT1BQ9Y5K3 369 aaPredicted RBP22.47■■□□□ 1.19
USP4-208ENST00000464168 INPP4BO15327 924 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 RAD1O60671 282 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 MAP3K6O95382 1288 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 ZNF30P17039 623 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 SLC25A11Q02978 314 aaKnown RBP22.46■■□□□ 1.19
USP4-208ENST00000464168 ITKQ08881 620 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 PIGHQ14442 188 aaPredicted RBP22.46■■□□□ 1.19
USP4-208ENST00000464168 OR10G6Q8NH81 332 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 EXD1Q8NHP7 514 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 AHCYL2Q96HN2 611 aaKnown RBP22.46■■□□□ 1.19
USP4-208ENST00000464168 SLC38A3Q99624 504 aa22.46■■□□□ 1.19
USP4-208ENST00000464168 PYGLP06737 847 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 POLE2P56282 527 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 RAB15P59190 212 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 TLE1Q04724 770 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 TYRO3Q06418 890 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 MMRN1Q13201 1228 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 ALG1LQ6GMV1 187 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 ARHGAP22Q7Z5H3 698 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 NRSN1Q8IZ57 195 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 NIPA2Q8N8Q9 360 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 BTBD6Q96KE9 485 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 POLR1EQ9GZS1 481 aaKnown RBP22.45■■□□□ 1.18
USP4-208ENST00000464168 ZNHIT2Q9UHR6 403 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 CNOT6Q9ULM6 557 aaKnown RBP22.45■■□□□ 1.18
USP4-208ENST00000464168 CHKBQ9Y259 395 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 PRKAB1Q9Y478 270 aa22.45■■□□□ 1.18
USP4-208ENST00000464168 DUX1O43812 170 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 DNAJC6O75061 913 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 PRLP01236 227 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 EPHB1P54762 984 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 MC2RQ01718 297 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 DSC2Q02487 901 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 KCNAB2Q13303 367 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 SNAP47Q5SQN1 464 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 WDR74Q6RFH5 385 aaPredicted RBP22.44■■□□□ 1.18
USP4-208ENST00000464168 PTRH1Q86Y79 214 aaKnown RBP22.44■■□□□ 1.18
USP4-208ENST00000464168 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.44■■□□□ 1.18
USP4-208ENST00000464168 ZNF564Q8TBZ8 553 aaPredicted RBP22.44■■□□□ 1.18
USP4-208ENST00000464168 MAML1Q92585 1016 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 RTP4Q96DX8 246 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 NAP1L5Q96NT1 182 aaPredicted RBP22.44■■□□□ 1.18
USP4-208ENST00000464168 TEFMQ96QE5 360 aaKnown RBP22.44■■□□□ 1.18
USP4-208ENST00000464168 TBC1D29Q9UFV1 150 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 OAS3Q9Y6K5 1087 aaKnown RBP22.44■■□□□ 1.18
USP4-208ENST00000464168 RELNP78509 3460 aa22.44■■□□□ 1.18
USP4-208ENST00000464168 ZNF891A8MT65 544 aaPredicted RBP22.43■■□□□ 1.18
USP4-208ENST00000464168 A8MU76 341 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 CLDN7O95471 211 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 ASMTLO95671 621 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 ATP1A1P05023 1023 aaKnown RBP22.43■■□□□ 1.18
USP4-208ENST00000464168 CD48P09326 243 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 GARSP41250 739 aaKnown RBP22.43■■□□□ 1.18
USP4-208ENST00000464168 HHEXQ03014 270 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 GALNT2Q10471 571 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 KRT81Q14533 505 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 FILIP1LQ4L180 1135 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 COLEC12Q5KU26 742 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 IYDQ6PHW0 289 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 FAM71BQ8TC56 605 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 SLC45A3Q96JT2 553 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 WDR24Q96S15 920 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 CTRCQ99895 268 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 ZMYND15Q9H091 742 aa22.43■■□□□ 1.18
USP4-208ENST00000464168 SARS2Q9NP81 518 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms