RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NCKIPSDQ9NZQ3 722 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 FAM153AQ9UHL3 310 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 DNPEPQ9ULA0 475 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 PADI4Q9UM07 663 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 PLEKHM1Q9Y4G2 1056 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 APC2O95996 2303 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 TMEM8BA6NDV4 472 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 NDST3O95803 873 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 SLC4A1P02730 911 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 AK4P27144 223 aaPredicted RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 GNPDA1P46926 289 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 GSDMDP57764 484 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 TMC3Q7Z5M5 1100 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 ARL10Q8N8L6 244 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 GPR26Q8NDV2 337 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 MAPK15Q8TD08 544 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 GPBAR1Q8TDU6 330 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 SCG3Q8WXD2 468 aaKnown RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 HIC2Q96JB3 615 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 VAT1Q99536 393 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 ABCG4Q9H172 646 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 FAM83DQ9H4H8 585 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 PCDHB1Q9Y5F3 818 aa12.9□□□□□ -0.34
XRN1-203ENST00000463916 OAS3Q9Y6K5 1087 aaKnown RBP12.9□□□□□ -0.34
XRN1-203ENST00000463916 COL27A1Q8IZC6 1860 aaPredicted RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 TCRBV7S2A1N4TA0A589 114 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 NOBOXO60393 691 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 RBP3P10745 1247 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 SIRPB2Q5JXA9 342 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 OGFOD3Q6PK18 319 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 PROSER1Q86XN7 944 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 RAVER1Q8IY67 606 aaKnown RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 SYCE1Q8N0S2 351 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 CCHCR1Q8TD31 782 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 CCDC86Q9H6F5 360 aaKnown RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 GUCA1BQ9UMX6 200 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 PKD1L2Q7Z442 2459 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 CHD6Q8TD26 2715 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 GOLGA6L6A8MZA4 724 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 TJP3O95049 919 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 ADCY8P40145 1251 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 RPIAP49247 311 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 KLF1Q13351 362 aaPredicted RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 ALS2CLQ60I27 953 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 CACTIN-AS1Q8N1I8 211 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 SLC25A41Q8N5S1 370 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 RNF10Q8N5U6 811 aaKnown RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 IPMKQ8NFU5 416 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 GLMNQ92990 594 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 DPEP2Q9H4A9 486 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 ARFGAP3Q9NP61 516 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 TRNAU1APQ9NX07 287 aaKnown RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 PKD2L2Q9NZM6 624 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 TRHDEQ9UKU6 1024 aa12.89□□□□□ -0.35
XRN1-203ENST00000463916 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
XRN1-203ENST00000463916 LOC400499M0QZD8 3231 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 RGSL1A5PLK6 1076 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 MIF4GDA9UHW6 222 aaKnown RBP12.88□□□□□ -0.35
XRN1-203ENST00000463916 KCNN4O15554 427 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 ARHGAP6O43182 974 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 FGF1P05230 155 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 IVLP07476 585 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 BPIP17213 487 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 CTBSQ01459 385 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 OLIG2Q13516 323 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 SLC1A5Q15758 541 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 ANKRD20A2Q5SQ80 823 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 ZNF648Q5T619 568 aaPredicted RBP12.88□□□□□ -0.35
XRN1-203ENST00000463916 ANKRD20A1Q5TYW2 823 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 ANKRD20A3Q5VUR7 823 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 DARS2Q6PI48 645 aaKnown RBP12.88□□□□□ -0.35
XRN1-203ENST00000463916 LRRC8AQ8IWT6 810 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 UBL4BQ8N7F7 174 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 CCDC74AQ96AQ1 378 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 GBA3Q9H227 469 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 BPIFA1Q9NP55 256 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 EVA1BQ9NVM1 165 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
XRN1-203ENST00000463916 B4DGG1 531 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 DNAJC6O75061 913 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 AGTP01019 485 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 EPOP01588 193 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 PYCR3Q53H96 274 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 CCDC70Q6NSX1 233 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 SLC30A9Q6PML9 568 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 CCDC110Q8TBZ0 833 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms