RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 HMGCLP35914 325 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 NR0B2Q15466 257 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 RANBP10Q6VN20 620 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 TMPRSS7Q7RTY8 843 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 TMPRSS12Q86WS5 348 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 PELI3Q8N2H9 469 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 OR6C4Q8NGE1 309 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 NAT6Q93015 286 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 PDXPQ96GD0 296 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 WDR24Q96S15 920 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 GORASP1Q9BQQ3 440 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 LGR4Q9BXB1 951 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 CLPBQ9H078 707 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 TCEAL2Q9H3H9 227 aaPredicted RBP13□□□□□ -0.33
R3HDM1-213ENST00000463230 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 DOLKQ9UPQ8 538 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 MSRB2Q9Y3D2 182 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
R3HDM1-213ENST00000463230 NCOR2Q9Y618 2525 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 PDE1BQ01064 536 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 OASLQ15646 514 aaKnown RBP12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 SMAD1Q15797 465 aaKnown RBP12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 CCNG2Q16589 344 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 C4orf22Q6V702 233 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 RFLNAQ6ZTI6 216 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 TTC30BQ8N4P2 665 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 CCDC110Q8TBZ0 833 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 SCAMP4Q969E2 229 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 FICDQ9BVA6 458 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 GSDMCQ9BYG8 508 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 C10orf88Q9H8K7 445 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 CD84Q9UIB8 345 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 DCHS1Q96JQ0 3298 aa12.99□□□□□ -0.33
R3HDM1-213ENST00000463230 TCRBV7S2A1N4TA0A589 114 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 ERI2A8K979 691 aaKnown RBP12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 YY2O15391 372 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 LRP8Q14114 963 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 ARL10Q8N8L6 244 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 FAM71DQ8N9W8 422 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 WDR48Q8TAF3 677 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 LRRC40Q9H9A6 602 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 CYP4F12Q9HCS2 524 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 SPO11Q9Y5K1 396 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 PTPRBP23467 1997 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 LY6G6EA0A0G2JKS1 128 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 FDFT1P37268 417 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 ILF3Q12906 894 aaKnown RBP eCLIP12.98□□□□□ -0.333e-8■■■■■ 28.1
R3HDM1-213ENST00000463230 DEFB133Q30KQ1 61 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 OGFOD3Q6PK18 319 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 RD3Q7Z3Z2 195 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 CHCHD4Q8N4Q1 142 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 EID2BQ96D98 161 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 PBKQ96KB5 322 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 VPS35Q96QK1 796 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 TBL1YQ9BQ87 522 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 SCNM1Q9BWG6 230 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 SHOC2Q9UQ13 582 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 DRG1Q9Y295 367 aaKnown RBP12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 U3KQA8 63 aa12.98□□□□□ -0.33
R3HDM1-213ENST00000463230 A0A0U1RQS6 177 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 TMEM8BA6NDV4 472 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 HYAL3O43820 417 aaPredicted RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 ACTN2P35609 894 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 DNAJC3Q13217 504 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 TAF1AQ15573 450 aaPredicted RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 KCTD11Q693B1 232 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 GLT6D1Q7Z4J2 308 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 REXO1L1PQ8IX06 675 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 SLC25A41Q8N5S1 370 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 GPR26Q8NDV2 337 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 OR2M4Q96R27 311 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 TMEM121Q9BTD3 319 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 CARS2Q9HA77 564 aaKnown RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 IL17CQ9P0M4 197 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 CNOT6Q9ULM6 557 aaKnown RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 GPR34Q9UPC5 381 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 PKP3Q9Y446 797 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 ZNF106Q9H2Y7 1883 aaKnown RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 PIRTP0C851 137 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 BPIP17213 487 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 SPAM1P38567 509 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 C1orf61Q13536 156 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 CCNI2Q6ZMN8 369 aaPredicted RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 LINC00523Q86TU6 105 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 PHYKPLQ8IUZ5 450 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 NAP1L3Q99457 506 aaPredicted RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 AGAP2Q99490 1192 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 KCNF1Q9H3M0 494 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 TTC7AQ9ULT0 858 aaPredicted RBP12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 SUFUQ9UMX1 484 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 ZNF148Q9UQR1 794 aa12.97□□□□□ -0.33
R3HDM1-213ENST00000463230 C2orf81A6NN90 581 aa12.96□□□□□ -0.33
R3HDM1-213ENST00000463230 FADS2P1A8MWK0 482 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms