RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 PRAMEF11O60813 436 aa15.13■□□□□ 0.01
APP-211ENST00000462267 SPAG6O75602 509 aa15.13■□□□□ 0.01
APP-211ENST00000462267 HEXIM1O94992 359 aaKnown RBP15.13■□□□□ 0.01
APP-211ENST00000462267 LSM8O95777 96 aaKnown RBP15.13■□□□□ 0.01
APP-211ENST00000462267 EML2O95834 649 aa15.13■□□□□ 0.01
APP-211ENST00000462267 GOLGA6DP0CG33 693 aa15.13■□□□□ 0.01
APP-211ENST00000462267 FGF5P12034 268 aa15.13■□□□□ 0.01
APP-211ENST00000462267 ETV3P41162 512 aa15.13■□□□□ 0.01
APP-211ENST00000462267 NSUN2Q08J23 767 aaKnown RBP eCLIP15.13■□□□□ 0.01
APP-211ENST00000462267 CHAF1BQ13112 559 aa15.13■□□□□ 0.01
APP-211ENST00000462267 EXOC3L4Q17RC7 722 aa15.13■□□□□ 0.01
APP-211ENST00000462267 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
APP-211ENST00000462267 IYDQ6PHW0 289 aa15.13■□□□□ 0.01
APP-211ENST00000462267 SLC9B2Q86UD5 537 aa15.13■□□□□ 0.01
APP-211ENST00000462267 GALNT13Q8IUC8 556 aa15.13■□□□□ 0.01
APP-211ENST00000462267 RHOT1Q8IXI2 618 aa15.13■□□□□ 0.01
APP-211ENST00000462267 FAM71AQ8IYT1 594 aa15.13■□□□□ 0.01
APP-211ENST00000462267 FMR1NBQ8N0W7 255 aaPredicted RBP15.13■□□□□ 0.01
APP-211ENST00000462267 CENPIQ92674 756 aaPredicted RBP15.13■□□□□ 0.01
APP-211ENST00000462267 C19orf60Q96EN9 201 aa15.13■□□□□ 0.01
APP-211ENST00000462267 MFRPQ9BY79 579 aa15.13■□□□□ 0.01
APP-211ENST00000462267 BRD8Q9H0E9 1235 aa15.13■□□□□ 0.01
APP-211ENST00000462267 RUBCNLQ9H714 662 aa15.13■□□□□ 0.01
APP-211ENST00000462267 CATSPERBQ9H7T0 1116 aa15.13■□□□□ 0.01
APP-211ENST00000462267 METTL5Q9NRN9 209 aaKnown RBP15.13■□□□□ 0.01
APP-211ENST00000462267 GOLGA6AQ9NYA3 693 aa15.13■□□□□ 0.01
APP-211ENST00000462267 DNAJC12Q9UKB3 198 aa15.13■□□□□ 0.01
APP-211ENST00000462267 HIVEP1P15822 2718 aa15.13■□□□□ 0.01
APP-211ENST00000462267 POLEQ07864 2286 aa15.13■□□□□ 0.01
APP-211ENST00000462267 PDZD2O15018 2839 aa15.12■□□□□ 0.01
APP-211ENST00000462267 NF1P21359 2839 aa15.12■□□□□ 0.01
APP-211ENST00000462267 A0A1W2PQ67 120 aa15.12■□□□□ 0.01
APP-211ENST00000462267 ANKUB1A6NFN9 424 aa15.12■□□□□ 0.01
APP-211ENST00000462267 ARGFXA6NJG6 315 aa15.12■□□□□ 0.01
APP-211ENST00000462267 PSMD11O00231 422 aa15.12■□□□□ 0.01
APP-211ENST00000462267 KRT86O43790 486 aa15.12■□□□□ 0.01
APP-211ENST00000462267 PALMO75781 387 aa15.12■□□□□ 0.01
APP-211ENST00000462267 CEACAM4O75871 244 aa15.12■□□□□ 0.01
APP-211ENST00000462267 C9P02748 559 aa15.12■□□□□ 0.01
APP-211ENST00000462267 SLC2A4P14672 509 aa15.12■□□□□ 0.01
APP-211ENST00000462267 CYP11B1P15538 503 aa15.12■□□□□ 0.01
APP-211ENST00000462267 PON1P27169 355 aa15.12■□□□□ 0.01
APP-211ENST00000462267 VIPR1P32241 457 aa15.12■□□□□ 0.01
APP-211ENST00000462267 PTPN9P43378 593 aa15.12■□□□□ 0.01
APP-211ENST00000462267 DPTQ07507 201 aa15.12■□□□□ 0.01
APP-211ENST00000462267 ELOAQ14241 798 aaKnown RBP15.12■□□□□ 0.01
APP-211ENST00000462267 DENND2CQ68D51 928 aa15.12■□□□□ 0.01
APP-211ENST00000462267 HSD11B1LQ7Z5J1 315 aa15.12■□□□□ 0.01
APP-211ENST00000462267 SLFN11Q7Z7L1 901 aa15.12■□□□□ 0.01
APP-211ENST00000462267 SYVN1Q86TM6 617 aa15.12■□□□□ 0.01
APP-211ENST00000462267 AVL9Q8NBF6 648 aa15.12■□□□□ 0.01
APP-211ENST00000462267 SNRNP40Q96DI7 357 aaKnown RBP15.12■□□□□ 0.01
APP-211ENST00000462267 HERPUD2Q9BSE4 406 aa15.12■□□□□ 0.01
APP-211ENST00000462267 UNKQ9C0B0 810 aaKnown RBP15.12■□□□□ 0.01
APP-211ENST00000462267 CNOT8Q9UFF9 292 aaKnown RBP15.12■□□□□ 0.01
APP-211ENST00000462267 HOOK1Q9UJC3 728 aaKnown RBP15.12■□□□□ 0.01
APP-211ENST00000462267 TMEM98Q9Y2Y6 226 aa15.12■□□□□ 0.01
APP-211ENST00000462267 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
APP-211ENST00000462267 LILRA5A6NI73 299 aa15.11■□□□□ 0.01
APP-211ENST00000462267 C2CD4BA6NLJ0 364 aa15.11■□□□□ 0.01
APP-211ENST00000462267 PPP1R3GB7ZBB8 358 aa15.11■□□□□ 0.01
APP-211ENST00000462267 PNMA6AP0CW24 399 aaPredicted RBP15.11■□□□□ 0.01
APP-211ENST00000462267 PTPN4P29074 926 aa15.11■□□□□ 0.01
APP-211ENST00000462267 GPR1P46091 355 aa15.11■□□□□ 0.01
APP-211ENST00000462267 GFERP55789 205 aa15.11■□□□□ 0.01
APP-211ENST00000462267 HDAC4P56524 1084 aa15.11■□□□□ 0.01
APP-211ENST00000462267 AP1S1P61966 158 aa15.11■□□□□ 0.01
APP-211ENST00000462267 SH3BP2P78314 561 aa15.11■□□□□ 0.01
APP-211ENST00000462267 ISM2Q6H9L7 571 aa15.11■□□□□ 0.01
APP-211ENST00000462267 CYB5D1Q6P9G0 228 aa15.11■□□□□ 0.01
APP-211ENST00000462267 ADAMTSL4Q6UY14 1074 aa15.11■□□□□ 0.01
APP-211ENST00000462267 Q6ZVL8 140 aa15.11■□□□□ 0.01
APP-211ENST00000462267 MARK2Q7KZI7 788 aaKnown RBP15.11■□□□□ 0.01
APP-211ENST00000462267 PPP1R3BQ86XI6 285 aa15.11■□□□□ 0.01
APP-211ENST00000462267 IQCKQ8N0W5 287 aa15.11■□□□□ 0.01
APP-211ENST00000462267 PYROXD2Q8N2H3 581 aa15.11■□□□□ 0.01
APP-211ENST00000462267 RBMXL3Q8N7X1 1067 aaKnown RBP15.11■□□□□ 0.01
APP-211ENST00000462267 GPT2Q8TD30 523 aa15.11■□□□□ 0.01
APP-211ENST00000462267 FAM172AQ8WUF8 416 aa15.11■□□□□ 0.01
APP-211ENST00000462267 SNX21Q969T3 373 aa15.11■□□□□ 0.01
APP-211ENST00000462267 ELMO2Q96JJ3 720 aa15.11■□□□□ 0.01
APP-211ENST00000462267 CINPQ9BW66 212 aaPredicted RBP15.11■□□□□ 0.01
APP-211ENST00000462267 TBC1D10AQ9BXI6 508 aa15.11■□□□□ 0.01
APP-211ENST00000462267 LRRC19Q9H756 370 aa15.11■□□□□ 0.01
APP-211ENST00000462267 AJAP1Q9UKB5 411 aaPredicted RBP15.11■□□□□ 0.01
APP-211ENST00000462267 CTNND2Q9UQB3 1225 aa15.11■□□□□ 0.01
APP-211ENST00000462267 MTORP42345 2549 aa15.11■□□□□ 0.01
APP-211ENST00000462267 KIR2DS5A0A0G2JLQ3 304 aa15.1■□□□□ 0.01
APP-211ENST00000462267 A0A0G2JNG1 304 aa15.1■□□□□ 0.01
APP-211ENST00000462267 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.1■□□□□ 0.01
APP-211ENST00000462267 FAM170AA1A519 330 aa15.1■□□□□ 0.01
APP-211ENST00000462267 KIR2DS3K7RE56 304 aa15.1■□□□□ 0.01
APP-211ENST00000462267 FGF10O15520 208 aaPredicted RBP15.1■□□□□ 0.01
APP-211ENST00000462267 FGFR1OPO95684 399 aaKnown RBP15.1■□□□□ 0.01
APP-211ENST00000462267 CYP2A6P11509 494 aaPredicted RBP15.1■□□□□ 0.01
APP-211ENST00000462267 SEPHS1P49903 392 aa15.1■□□□□ 0.01
APP-211ENST00000462267 SCNN1BP51168 640 aa15.1■□□□□ 0.01
APP-211ENST00000462267 ITGA1P56199 1179 aa15.1■□□□□ 0.01
APP-211ENST00000462267 RPS15P62841 145 aaKnown RBP15.1■□□□□ 0.01
APP-211ENST00000462267 KIR2DS5Q14953 304 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms