RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GLOD4Q9HC38 313 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 TAAR2Q9P1P5 351 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 REXO2Q9Y3B8 237 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF711Q9Y462 761 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 EPN1Q9Y6I3 576 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 A0A1W2PQM1 296 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 MACROD2A1Z1Q3 448 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 FADS2P1A8MWK0 482 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 RRP8O43159 456 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 MTSS1O43312 755 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 DXOO77932 396 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ZRANB2O95218 330 aaKnown RBP eCLIP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 MT-CYBP00156 380 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 FUCA1P04066 466 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 PIRTP0C851 137 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 GLB1P16278 677 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 NFKB1P19838 968 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ADCY8P40145 1251 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 EIF2S3P41091 472 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ACTR1BP42025 376 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 LSSP48449 732 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 VAV2P52735 878 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 NAP1L1P55209 391 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 MAZP56270 477 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 PCBP4P57723 403 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ACTR1AP61163 376 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 CTBSQ01459 385 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 CDK18Q07002 472 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 WASHC5Q12768 1159 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF569Q5MCW4 686 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ALS2CLQ60I27 953 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 OGFOD3Q6PK18 319 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 RAD9BQ6WBX8 426 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 KDELC2Q7Z4H8 507 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 SPRED1Q7Z699 444 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ZC3H18Q86VM9 953 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 NRROSQ86YC3 692 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 GALNT13Q8IUC8 556 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 RCOR2Q8IZ40 523 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 LSMEM2Q8N112 164 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 SPATA22Q8NHS9 363 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ZDHHC1Q8WTX9 485 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 TADA1Q96BN2 335 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 CALR3Q96L12 384 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 TEKT5Q96M29 485 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF578Q96N58 590 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 WDR24Q96S15 920 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 ZFYVE1Q9HBF4 777 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 SPATS2LQ9NUQ6 558 aaKnown RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 VPS18Q9P253 973 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 KLHL8Q9P2G9 620 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-204ENST00000462258 APPL1Q9UKG1 709 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 TMEM98Q9Y2Y6 226 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 RNF215Q9Y6U7 377 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 LOC400499M0QZD8 3231 aa10.11□□□□□ -0.79
SF3A3-204ENST00000462258 CCDC187A0A096LP49 1063 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 A0A1W2PNU3 283 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 RGSL1A5PLK6 1076 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 BTNL10A8MVZ5 291 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 HACD1B0YJ81 288 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 F5H423 210 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 NUDT21O43809 227 aaKnown RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PMPCBO75439 489 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 ASMTLO95671 621 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 NDST3O95803 873 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 APOC2P02655 101 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PNLIPP16233 465 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 CD68P34810 354 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 DCDC1P59894 354 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 CCL7P80098 99 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PEX6Q13608 980 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 LRP8Q14114 963 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 NOMO1Q15155 1222 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 MAP9Q49MG5 647 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 CCDC181Q5TID7 509 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 FOXR1Q6PIV2 292 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 LRRC69Q6ZNQ3 347 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 BBS12Q6ZW61 710 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 B3GNT8Q7Z7M8 397 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 KIAA1328Q86T90 577 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PDZD3Q86UT5 571 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 Q8N9G6 341 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 WDR36Q8NI36 951 aaKnown RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 PATE1Q8WXA2 126 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 HTR3CQ8WXA8 447 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 FGF11Q92914 225 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 EID2BQ96D98 161 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 SCARF2Q96GP6 870 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 LIN37Q96GY3 246 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 VAT1Q99536 393 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-204ENST00000462258 HEMGNQ9BXL5 484 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 FOXP3Q9BZS1 431 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 LRRN3Q9H3W5 708 aa10.1□□□□□ -0.79
SF3A3-204ENST00000462258 FAM83DQ9H4H8 585 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms