RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 APLFQ8IW19 511 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-202ENST00000461127 PYROXD2Q8N2H3 581 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 SFRP1Q8N474 314 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 CENPIQ92674 756 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-202ENST00000461127 STAMBPL1Q96FJ0 436 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 CINPQ9BW66 212 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-202ENST00000461127 SLC29A3Q9BZD2 475 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 KLHL3Q9UH77 587 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 MAP4K5Q9Y4K4 846 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 C2CD3Q4AC94 2353 aa17.12■□□□□ 0.33
TOP3A-202ENST00000461127 SHANK1Q9Y566 2161 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 PIPSLA2A3N6 862 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 ARHGAP42A6NI28 874 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 MAP3K6O95382 1288 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 FURINP09958 794 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 TEAD1P28347 426 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 CDC25BP30305 580 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 MAPK9P45984 424 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 RGRP47804 291 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 NDST2P52849 883 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 LRP8Q14114 963 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 CNGA3Q16281 694 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 LZTR1Q8N653 840 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 PTCD2Q8WV60 388 aaKnown RBP17.11■□□□□ 0.33
TOP3A-202ENST00000461127 DTD2Q96FN9 168 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 EPB41L1Q9H4G0 881 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 SARS2Q9NP81 518 aaKnown RBP17.11■□□□□ 0.33
TOP3A-202ENST00000461127 PLEKHM1Q9Y4G2 1056 aa17.11■□□□□ 0.33
TOP3A-202ENST00000461127 A0A1W2PQ67 120 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 TRAFD1O14545 582 aaPredicted RBP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 RECKO95980 971 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 PDGFAP04085 211 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 MMEP08473 750 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 CCNYL3P0C7X3 344 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 CASP14P31944 242 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 VIPR1P32241 457 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 ETV3P41162 512 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 EPHA4P54764 986 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 AP1S1P61966 158 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 NFATC2Q13469 925 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 SYCP1Q15431 976 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 EIF2S3LQ2VIR3 472 aaKnown RBP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 SCYL2Q6P3W7 929 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 GALNT13Q8IUC8 556 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 PLXDC1Q8IUK5 500 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 VSTM4Q8IW00 320 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 GALNT6Q8NCL4 622 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 JOSD2Q8TAC2 188 aa17.1■□□□□ 0.33
TOP3A-202ENST00000461127 SCARF2Q96GP6 870 aaPredicted RBP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.1■□□□□ 0.33
TOP3A-202ENST00000461127 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.09■□□□□ 0.33
TOP3A-202ENST00000461127 A6NCN8 305 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 CREG1O75629 220 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 HEXIM1O94992 359 aaKnown RBP17.09■□□□□ 0.33
TOP3A-202ENST00000461127 CYP2A6P11509 494 aaPredicted RBP17.09■□□□□ 0.33
TOP3A-202ENST00000461127 KRT3P12035 628 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 MMP8P22894 467 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 VARSP26640 1264 aaKnown RBP17.09■□□□□ 0.33
TOP3A-202ENST00000461127 GPR1P46091 355 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 SCNN1BP51168 640 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 SEMA5AQ13591 1074 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 RFTN1Q14699 578 aaPredicted RBP17.09■□□□□ 0.33
TOP3A-202ENST00000461127 TMEM135Q86UB9 458 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 PRR7Q8TB68 274 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 SEC14L1Q92503 715 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 SLC25A23Q9BV35 468 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 LRRC19Q9H756 370 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 SP110Q9HB58 689 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 PCDHGA6Q9Y5G7 932 aa17.09■□□□□ 0.33
TOP3A-202ENST00000461127 TNRC6AQ8NDV7 1962 aaKnown RBP17.08■□□□□ 0.33
TOP3A-202ENST00000461127 PSMD11O00231 422 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 DNAJB5O75953 348 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 SORBS2O94875 1100 aaKnown RBP17.08■□□□□ 0.32
TOP3A-202ENST00000461127 CLDN1O95832 211 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 ANKRD34CP0C6C1 535 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 SLC2A4P14672 509 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 ZNF28P17035 718 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 GPD1P21695 349 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 HTR7P34969 479 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 PAPOLAP51003 745 aaKnown RBP17.08■□□□□ 0.32
TOP3A-202ENST00000461127 RENBPP51606 427 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 AIF1P55008 147 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 TPI1P60174 286 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 NADK2Q4G0N4 442 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 PYCR3Q53H96 274 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 MARK2Q7KZI7 788 aaKnown RBP17.08■□□□□ 0.32
TOP3A-202ENST00000461127 SLC9B2Q86UD5 537 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 ZNF677Q86XU0 584 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 RASGRP3Q8IV61 690 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 SPC24Q8NBT2 197 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.32
TOP3A-202ENST00000461127 SPOCK2Q92563 424 aa17.08■□□□□ 0.32
TOP3A-202ENST00000461127 CELF6Q96J87 481 aaKnown RBP17.08■□□□□ 0.32
TOP3A-202ENST00000461127 C11orf70Q9BRQ4 267 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms