RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 DHX40Q8IX18 779 aaKnown RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 PCDH20Q8N6Y1 951 aaKnown RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 PLD5Q8N7P1 536 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 CSNK2A3Q8NEV1 391 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 WDR20Q8TBZ3 569 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 SLC39A13Q96H72 371 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 SLC41A2Q96JW4 573 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 PYM1Q9BRP8 204 aaKnown RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 H2AFJQ9BTM1 129 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 IFIH1Q9BYX4 1025 aaKnown RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 C20orf141Q9NUB4 165 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 C2orf42Q9NWW7 574 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 UTYO14607 1347 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 PSMD14O00487 310 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 SPINT2O43291 252 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 TACC1O75410 805 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 PRSS56P0CW18 603 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 ERVK-10P10266 1014 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 ZNF10P21506 573 aaPredicted RBP1.9□□□□□ -2.11
PTPN22-203ENST00000460620 HOXC8P31273 242 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 IRX1P78414 480 aaPredicted RBP1.9□□□□□ -2.11
PTPN22-203ENST00000460620 NAE1Q13564 534 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 SLC12A1Q13621 1099 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 TAF5Q15542 800 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 LPAL2Q16609 132 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 CCDC96Q2M329 555 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 WDR38Q5JTN6 314 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 NAA35Q5VZE5 725 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 ANO1Q5XXA6 986 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 OR7E24Q6IFN5 339 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 FAAP20Q6NZ36 180 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 DUS1LQ6P1R4 473 aaKnown RBP1.9□□□□□ -2.11
PTPN22-203ENST00000460620 PLEKHM3Q6ZWE6 761 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 LRRC8DQ7L1W4 858 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 RRM2BQ7LG56 351 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 SH2D6Q7Z4S9 175 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 ELP4Q96EB1 424 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 MPHOSPH8Q99549 860 aa1.9□□□□□ -2.11
PTPN22-203ENST00000460620 INTS2Q9H0H0 1204 aaKnown RBP1.9□□□□□ -2.11
PTPN22-203ENST00000460620 CNOT7Q9UIV1 285 aaKnown RBP1.9□□□□□ -2.11
PTPN22-203ENST00000460620 ZCWPW2A0A1B0GU75 182 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 TTC36A6NLP5 189 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 ARHGEF9O43307 516 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 FTCDO95954 541 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 URODP06132 367 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 AHRP35869 848 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 PSMC2P35998 433 aaKnown RBP1.89□□□□□ -2.11
PTPN22-203ENST00000460620 NR2C2P49116 596 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 CDH15P55291 814 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 SORDQ00796 357 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 ITGA9Q13797 1035 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 ATG16L1Q676U5 607 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 C15orf39Q6ZRI6 1047 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 CACNA2D4Q7Z3S7 1137 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 TDRPQ86YL5 185 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 OR52I2Q8NH67 350 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 ORAI1Q96D31 301 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 LINGO1Q96FE5 620 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 OPRPNQ99935 248 aaPredicted RBP1.89□□□□□ -2.11
PTPN22-203ENST00000460620 DCTN5Q9BTE1 182 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 UBXN6Q9BZV1 441 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 ERVMER34-1Q9H9K5 563 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 SLC52A3Q9NQ40 469 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 SLC7A10Q9NS82 523 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 ZDHHC18Q9NUE0 388 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 HSPB7Q9UBY9 170 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 C2CD2Q9Y426 696 aa1.89□□□□□ -2.11
PTPN22-203ENST00000460620 KRTAP16-1A8MUX0 517 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 KRTAP4-16G5E9R7 235 aaPredicted RBP1.88□□□□□ -2.11
PTPN22-203ENST00000460620 SEC14L5O43304 696 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 CTSVO60911 334 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 CRLF1O75462 422 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 GNB3P16520 340 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 AZU1P20160 251 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 PGM1P36871 562 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 AMPHP49418 695 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 MLLT10P55197 1068 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 TAS2R38P59533 333 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 LMO4P61968 165 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 PLIN5Q00G26 463 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.88□□□□□ -2.11
PTPN22-203ENST00000460620 NFIL3Q16649 462 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 DECR1Q16698 335 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 MYLK3Q32MK0 819 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 USP41Q3LFD5 358 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 TECRLQ5HYJ1 363 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 SIGIRRQ6IA17 410 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 PQLC2Q6ZP29 291 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 TRPT1Q86TN4 253 aaKnown RBP1.88□□□□□ -2.11
PTPN22-203ENST00000460620 GPR180Q86V85 440 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 SPATA5Q8NB90 893 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 OR5R1Q8NH85 324 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 ZCCHC10Q8TBK6 192 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 DNAAF4Q8WXU2 420 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 CCT6BQ92526 530 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 TAAR8Q969N4 342 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 ARHGEF26Q96DR7 871 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 LINC00479Q96M42 142 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 ATOH8Q96SQ7 321 aa1.88□□□□□ -2.11
PTPN22-203ENST00000460620 PCYT2Q99447 389 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms