RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 WDR26Q9H7D7 661 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 PHPT1Q9NRX4 125 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-209ENST00000460573 BFARQ9NZS9 450 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 SNX11Q9Y5W9 270 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 ARL5AQ9Y689 179 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 HEATR9A2RTY3 570 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 CACNB4O00305 520 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-209ENST00000460573 DNALI1O14645 258 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-209ENST00000460573 LDB2O43679 373 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 ZNF500O60304 480 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-209ENST00000460573 MLNP12872 115 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 KELP23276 732 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 SPAM1P38567 509 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 HADHAP40939 763 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 KIAA1024LP59773 190 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 ZNF423Q2M1K9 1284 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 HLA-BQ31612 363 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 ARMC3Q5W041 872 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 MACC1Q6ZN28 852 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 NLRP9Q7RTR0 991 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 HOOK3Q86VS8 718 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 SPATS2Q86XZ4 545 aaKnown RBP22.35■■□□□ 1.17
C9orf3-209ENST00000460573 SLC22A18ASQ8N1D0 253 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 TRAM1L1Q8N609 369 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 NAT8LQ8N9F0 302 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 TEX101Q9BY14 249 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 XAB2Q9HCS7 855 aaKnown RBP22.35■■□□□ 1.17
C9orf3-209ENST00000460573 BPIFA1Q9NP55 256 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 RIMKLBQ9ULI2 386 aa22.35■■□□□ 1.17
C9orf3-209ENST00000460573 PCDH15Q96QU1 1955 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 YKT6O15498 198 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 ADRA1DP25100 572 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 POU6F1Q14863 301 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 NFATC4Q14934 902 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 ST3GAL2Q16842 350 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 CERCAMQ5T4B2 595 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 OR4K2Q8NGD2 314 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 OR2I1PQ8NGU4 316 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 STYXQ8WUJ0 223 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 SPATA16Q9BXB7 569 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 IL22Q9GZX6 179 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 GAREM1Q9H706 876 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 PIH1D1Q9NWS0 290 aaKnown RBP22.34■■□□□ 1.17
C9orf3-209ENST00000460573 APPL1Q9UKG1 709 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 OR1A2Q9Y585 309 aa22.34■■□□□ 1.17
C9orf3-209ENST00000460573 TPRP12270 2363 aaKnown RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 CACNA1EQ15878 2313 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 TCRBV7S3A2A0A539 114 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 K7ESM1 405 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 SOD1P00441 154 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 MYCLP1P12525 358 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 IVDP26440 423 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 ARRB1P49407 418 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 ZNF140P52738 457 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 TERF1P54274 439 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 SEPT6Q14141 434 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 FZD2Q14332 565 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 KCTD19Q17RG1 926 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 SKIDA1Q1XH10 827 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 PCID2Q5JVF3 399 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 RNASEH2BQ5TBB1 312 aaKnown RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 ANKRD22Q5VYY1 191 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 PARGQ86W56 976 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 HEATR4Q86WZ0 1026 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 PELI3Q8N2H9 469 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 CEP112Q8N8E3 955 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 BBOF1Q8ND07 529 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 PEX13Q92968 403 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 FUBP1Q96AE4 644 aaKnown RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 HIC2Q96JB3 615 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 WDR92Q96MX6 357 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 ELF4Q99607 663 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 FRMD8Q9BZ67 464 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-209ENST00000460573 IL26Q9NPH9 171 aa22.33■■□□□ 1.17
C9orf3-209ENST00000460573 GLYATL1P3A0A0U1RQE8 302 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 CTAGE15A4D2H0 777 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 MROH6A6NGR9 719 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 EFCAB8A8MWE9 144 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 TNFRSF10CO14798 259 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 BUD23O43709 281 aaKnown RBP22.32■■□□□ 1.16
C9orf3-209ENST00000460573 ZNF883P0CG24 379 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 CTAGE8P0CG41 777 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 RXRGP48443 463 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 SIM1P81133 766 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-209ENST00000460573 CDK3Q00526 305 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 ITGA9Q13797 1035 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 IZUMO3Q5VZ72 239 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 ALS2CLQ60I27 953 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 ZNF534Q76KX8 674 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 CTAGE6Q86UF2 777 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 CTAGE4Q8IX94 777 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 PPHLN1Q8NEY8 458 aaKnown RBP22.32■■□□□ 1.16
C9orf3-209ENST00000460573 PTCD2Q8WV60 388 aaKnown RBP22.32■■□□□ 1.16
C9orf3-209ENST00000460573 SNF8Q96H20 258 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 AGAP2Q99490 1192 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 TRIM51Q9BSJ1 452 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 DNAAF2Q9NVR5 837 aaKnown RBP22.32■■□□□ 1.16
C9orf3-209ENST00000460573 NLE1Q9NVX2 485 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-209ENST00000460573 KCTD3Q9Y597 815 aa22.32■■□□□ 1.16
C9orf3-209ENST00000460573 LAMA1P25391 3075 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms