RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ZNF669Q96BR6 464 aaPredicted RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 TGIF2Q9GZN2 237 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 MKRN2Q9H000 416 aaKnown RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 RABEP2Q9H5N1 569 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 C8orf33Q9H7E9 229 aaPredicted RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 CD93Q9NPY3 652 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 CTNNAL1Q9UBT7 734 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 SLC8A2Q9UPR5 921 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 EDDM13A0A1B0GTR0 161 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 ZCWPW2A0A1B0GU75 182 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 A0A1W2PQF6 199 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 C1QAP02745 245 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 TIMP2P16035 220 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 HLA-DPA1P20036 260 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 CES1P23141 567 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 TARSP26639 723 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 ABCG1P45844 678 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 NPY2RP49146 381 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 PFKPQ01813 784 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 ANKRD20A4Q4UJ75 823 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 TRMT10CQ7L0Y3 403 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 PARS2Q7L3T8 475 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 HDXQ7Z353 690 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 LYSMD3Q7Z3D4 306 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 METTL3Q86U44 580 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 PIP4K2CQ8TBX8 421 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 SGCDQ92629 289 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 ECHDC3Q96DC8 303 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 CPEB1Q9BZB8 566 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 FOXP3Q9BZS1 431 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 IL22Q9GZX6 179 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 ACBD3Q9H3P7 528 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 PPANQ9NQ55 473 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 ARHGEF3Q9NR81 526 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 SAMD15Q9P1V8 674 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 SERGEFQ9UGK8 458 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 FBXL21Q9UKT6 434 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 PPM1HQ9ULR3 514 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 TCAF1Q9Y4C2 921 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 MUC22E2RYF6 1773 aaPredicted RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 MYLKQ15746 1914 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 POC1B-GALNT4F8VUJ3 575 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 MAP2K7O14733 419 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 CASQ2O14958 399 aaPredicted RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 EIF3HO15372 352 aaKnown RBP eCLIP10.31□□□□□ -0.76
USP39-210ENST00000459775 CLDN7O95471 211 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 EPOP01588 193 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 FGF1P05230 155 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 LHCGRP22888 699 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 ARNTP27540 789 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 LRRC74AQ0VAA2 488 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 PDE1CQ14123 709 aaPredicted RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 GAS6Q14393 721 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 UBXN2BQ14CS0 331 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 TTC7BQ86TV6 843 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 LDB1Q86U70 411 aaPredicted RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 ANKRD42Q8N9B4 389 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 OR8H1Q8NGG4 311 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 OR13J1Q8NGT2 312 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 NAT14Q8WUY8 206 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 DNAJC1Q96KC8 554 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 AGAP2Q99490 1192 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 ADGRE3Q9BY15 652 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 MRPL46Q9H2W6 279 aaKnown RBP10.31□□□□□ -0.76
USP39-210ENST00000459775 MFSD1Q9H3U5 465 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.31□□□□□ -0.764e-10■■■□□ 17.5
USP39-210ENST00000459775 CROTQ9UKG9 612 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 SOX13Q9UN79 622 aa10.31□□□□□ -0.76
USP39-210ENST00000459775 A0A0J9YYE9 177 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 C16orf96A6NNT2 1141 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 NDC80O14777 642 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 VAPBO95292 243 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 TRBC1P01850 177 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 EPB42P16452 691 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 PGAM1P18669 254 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 DRD1P21728 446 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 GCAP28676 217 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 NTSR1P30989 418 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CENPAP49450 140 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 FOXK1P85037 733 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 RAD51Q06609 339 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ZNF844Q08AG5 666 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ENPP2Q13822 863 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 UGP2Q16851 508 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 PCID2Q5JVF3 399 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CRTC1Q6UUV9 634 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 GLT6D1Q7Z4J2 308 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 TMEM135Q86UB9 458 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ESX1Q8N693 406 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 TMEM105Q8N8V8 129 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 OR4K2Q8NGD2 314 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 OR8D1Q8WZ84 308 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 TBATAQ96M53 351 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 PPP1R2P1Q96PQ5 205 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms