RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 IKZF2Q9UKS7 526 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 MATN4O95460 622 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 CXCL14O95715 111 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 RNF220Q5VTB9 566 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 REP15Q6BDI9 236 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 NIPA1Q7RTP0 329 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 GPR142Q7Z601 462 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 LMAN2LQ9H0V9 348 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 AKAP7Q9P0M2 348 aaPredicted RBP19.61■□□□□ 0.73
SNX27-204ENST00000458013 MFSD11O43934 449 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 LCA5LO95447 670 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 ACLYP53396 1101 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 SULT1C3Q6IMI6 304 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 SAMD3Q8N6K7 520 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 FAM110BQ8TC76 370 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 ING5Q8WYH8 240 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 CD101Q93033 1021 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 COX4I2Q96KJ9 171 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 AGO3Q9H9G7 860 aaKnown RBP19.61■□□□□ 0.73
SNX27-204ENST00000458013 MBD2Q9UBB5 411 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 EVLQ9UI08 416 aaPredicted RBP19.61■□□□□ 0.73
SNX27-204ENST00000458013 NRCAMQ92823 1304 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 OR2AG2A6NM03 316 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 KLRC4O43908 158 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 CXCR2P25025 360 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 C9orf64Q5T6V5 341 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 SH3RF1Q7Z6J0 888 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 PYROXD2Q8N2H3 581 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 DPEP3Q9H4B8 488 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 TRAF6Q9Y4K3 522 aa19.61■□□□□ 0.73
SNX27-204ENST00000458013 ARMC5Q96C12 935 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 NWD1Q149M9 1564 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 MAFO75444 373 aaPredicted RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 RASGRP1O95267 797 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 CD48P09326 243 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 PITRM1Q5JRX3 1037 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 PTCD2Q8WV60 388 aaKnown RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 B3GALT6Q96L58 329 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 CLK4Q9HAZ1 481 aaKnown RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 SUCOQ9UBS9 1254 aaKnown RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 DCLK1O15075 740 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 PRODHO43272 600 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 GTF2BQ00403 316 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 DUPD1Q68J44 220 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 CROCCP3Q8IVE0 287 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 DNASE1L2Q92874 299 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 TBC1D24Q9ULP9 559 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 ING4Q9UNL4 249 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 TLR5O60602 858 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 SAGP10523 405 aaPredicted RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 CES5AQ6NT32 575 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 FAM83AQ86UY5 434 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 C12orf50Q8NA57 414 aaPredicted RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 GSDMCQ9BYG8 508 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 CORO2BQ9UQ03 480 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 CAPN8A6NHC0 703 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 hCG_2039718K7EN88 272 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 SAP18O00422 153 aaKnown RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 ZNF432O94892 652 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 RPS6KA3P51812 740 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 ZNF155Q12901 538 aaPredicted RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 CCNYL2Q5T2Q4 361 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 GTPBP3Q969Y2 492 aaKnown RBP19.6■□□□□ 0.73
SNX27-204ENST00000458013 KLHL32Q96NJ5 620 aa19.6■□□□□ 0.73
SNX27-204ENST00000458013 NEK5Q6P3R8 708 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 DEPDC4Q8N2C3 294 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 SPATA5L1Q9BVQ7 753 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 PNPLA3Q9NST1 481 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 MALT1Q9UDY8 824 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 GGA2Q9UJY4 613 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 R3HDM2Q9Y2K5 976 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 DIP2BQ9P265 1576 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 GIMD1P0DJR0 217 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 WNT3AP56704 352 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 KLF1Q13351 362 aaPredicted RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 RIPK1Q13546 671 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 C9orf57Q5W0N0 161 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 FAM91A1Q658Y4 838 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 AMER2Q8N7J2 671 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 ZCCHC10Q8TBK6 192 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 C9IYK1 514 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 NT5EP21589 574 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 NDUFV1P49821 464 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 GJA9P57773 515 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 HSPB3Q12988 150 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 TTC23Q5W5X9 447 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 SMARCD3Q6STE5 483 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 OR4K2Q8NGD2 314 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 UBE2E3Q969T4 207 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 GFM1Q96RP9 751 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 SEMA3GQ9NS98 782 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 FBXW2Q9UKT8 454 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 TTC24A2A3L6 582 aaPredicted RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 POLR2JP52435 117 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 ZNF846Q147U1 533 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 CPTPQ5TA50 214 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 AKAP14Q86UN6 197 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 SIDT2Q8NBJ9 832 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 KBTBD8Q8NFY9 601 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 UROC1Q96N76 676 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms