RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PDZD8Q8NEN9 1154 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 ADCY4Q8NFM4 1077 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 OR4K2Q8NGD2 314 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 OVCA2Q8WZ82 227 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 SEPT8Q92599 483 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 EZH1Q92800 747 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 TDRD1Q9BXT4 1180 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 MRPL9Q9BYD2 267 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 DERL2Q9GZP9 239 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 TBKBP1A7MCY6 615 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 COCHO43405 550 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 DENRO43583 198 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 NRP2O60462 931 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 EFEMP2O95967 443 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 SGSHP51688 502 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 BFSP2Q13515 415 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 HECTD3Q5T447 861 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 KANK2Q63ZY3 851 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 PAQR3Q6TCH7 311 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 SNX31Q8N9S9 440 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 B4GALNT2Q8NHY0 566 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 TOP1MTQ969P6 601 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 PLD4Q96BZ4 506 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 ZNF512Q96ME7 567 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 TCF12Q99081 682 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 PKP2Q99959 881 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 COPS7BQ9H9Q2 264 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 MID1IP1Q9NPA3 183 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 MTRRQ9UBK8 725 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 CD300AQ9UGN4 299 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 IKZF3Q9UKT9 509 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 AZIN1O14977 448 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 HOXA2O43364 376 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 KERAO60938 352 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 RHOBTB1O94844 696 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 MT-CO1P00395 513 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 TCN1P20061 433 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 FMO4P31512 558 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 CHN2P52757 468 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 RARS2Q5T160 578 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 CHST9Q7L1S5 443 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 GLT6D1Q7Z4J2 308 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 SATL1Q86VE3 508 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 DNAJC5GQ8N7S2 189 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 CATSPER1Q8NEC5 780 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 OR9I1Q8NGQ6 314 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 PIP4K2CQ8TBX8 421 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 RMDN1Q96DB5 314 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 NSUN5Q96P11 429 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 NACA2Q9H009 215 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 SCUBE2Q9NQ36 999 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 TAS2R13Q9NYV9 303 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 AGO1Q9UL18 857 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 UBA6A0AVT1 1052 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 LCHNA4D1U4 455 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 MRASO14807 208 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 STC2O76061 302 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 C8BP07358 591 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 RHOCP08134 193 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 HMGA1P17096 107 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 CES1P23141 567 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 TUFMP49411 452 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 ATXN3P54252 364 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 FOXA1P55317 472 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 TRAP1Q12931 704 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 ARHGEF6Q15052 776 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 UGT2A3Q6UWM9 527 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 SPATA24Q86W54 205 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 PHYKPLQ8IUZ5 450 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 TMEM102Q8N9M5 508 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 SLAIN1Q8ND83 568 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 STAG3L4Q8TBR4 150 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 EXOC2Q96KP1 924 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 GCNAQ96QF7 691 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 SMIM14Q96QK8 99 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 ZBED2Q9BTP6 218 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 CWH43Q9H720 699 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 TMEM181Q9P2C4 612 aa18.3■□□□□ 0.52
SEMA3B-209ENST00000456560 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 RPL17P18621 184 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 ATP6V0D1P61421 351 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 ZNF177Q13360 481 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 FAM126BQ8IXS8 530 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 TWIST2Q8WVJ9 160 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 SPAG4Q9NPE6 437 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 HACD3Q9P035 362 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 CROTQ9UKG9 612 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 OAS3Q9Y6K5 1087 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 MKI67P46013 3256 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 GBF1Q92538 1859 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 SMIM31A0A1B0GVY4 71 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 PRORSD1PA6NEY8 169 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 C2orf81A6NN90 581 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 PIP5K1BO14986 540 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 AP1G1O43747 822 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 DNAJA2O60884 412 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 CLASP2O75122 1294 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 NDUFS3O75489 264 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms