RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GIMAP5Q96F15 307 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 OR52B2Q96RD2 323 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC3Q9BQI4 270 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PDE10AQ9Y233 779 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 POLR1DQ9Y2S0 133 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CD72P21854 359 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 GPRIN3Q6ZVF9 776 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TSPAN33Q86UF1 283 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SLC15A3Q8IY34 581 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ZBED3Q96IU2 234 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ACAT2Q9BWD1 397 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 HDHD5Q9BXW7 423 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC3Q9BY71 257 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 MUC3BQ9H195 1237 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LHX5Q9H2C1 402 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ST6GALNAC4Q9H4F1 302 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 EPB41L1Q9H4G0 881 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RNF146Q9NTX7 359 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 KDM3BQ7LBC6 1761 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CCNT2O60583 730 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RAMP2O60895 175 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PGDP52209 483 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 POU4F2Q12837 409 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 NEDD8Q15843 81 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RASGEF1CQ8N431 466 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 KIF2BQ8N4N8 673 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 C11orf65Q8NCR3 313 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 OSBPL7Q9BZF2 842 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 THG1LQ9NWX6 298 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 NPAP1Q9NZP6 1156 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TSR3Q9UJK0 312 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FBXO9Q9UK97 447 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PROM1O43490 865 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 NPHS1O60500 1241 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 IGSF6O95976 241 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SLC16A1P53985 500 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 USP46P62068 366 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ACTC1P68032 377 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ACTA1P68133 377 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ANKRD52Q8NB46 1076 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 IFT27Q9BW83 186 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 COMMD4Q9H0A8 199 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 EBF2Q9HAK2 575 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TRIM36Q9NQ86 728 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PCDHGC3Q9UN70 934 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 DOCK2Q92608 1830 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 M0R129 80 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PAPSS2O95340 614 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RAB36O95755 333 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PTPN11Q06124 597 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 BOP1Q14137 746 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LARS2Q15031 903 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RSU1Q15404 277 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ANKS1BQ7Z6G8 1248 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 GATAD2BQ8WXI9 593 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TCEAL4Q96EI5 215 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PNKPQ96T60 521 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FUCA2Q9BTY2 467 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PBDC1Q9BVG4 233 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FTHL17Q9BXU8 183 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ITM2CQ9NQX7 267 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF282Q9UDV7 671 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 HEBP2Q9Y5Z4 205 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TLX3O43711 291 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 IL1BP01584 269 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PCK2Q16822 640 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FAXCQ5TGI0 409 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 C1orf189Q5VU69 101 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PHACTR4Q8IZ21 702 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 HDDC3Q8N4P3 179 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PCSK9Q8NBP7 692 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 C18orf25Q96B23 403 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 HNRNPABQ99729 332 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 KIAA1683Q9H0B3 1180 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PLCL2Q9UPR0 1127 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SDK2Q58EX2 2172 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ARAP2Q8WZ64 1704 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PROCP04070 461 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CCNFP41002 786 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CRKLP46109 303 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 DBPQ10586 325 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LCP2Q13094 533 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 QRICH1Q2TAL8 776 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RTL4Q6ZR62 310 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RIPOR1Q6ZS17 1223 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 C3orf67Q6ZVT6 689 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 BRINP3Q76B58 766 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TTLL2Q9BWV7 592 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 HEMGNQ9BXL5 484 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 POPDC2Q9HBU9 364 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LIMD1Q9UGP4 676 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TEX13CA0A0J9YWL9 993 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 HTR3EA5X5Y0 456 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 DUXAA6NLW8 204 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 F5H6K3 240 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CYP26A1O43174 497 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 MT-ND2P03891 347 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FGFR1P11362 822 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 KLRC3Q07444 240 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms