RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SATB1Q01826 763 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 HYAL1Q12794 435 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 PDAP1Q13442 181 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 NFATC2Q13469 925 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 ENPP2Q13822 863 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 RCN2Q14257 317 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 ELAVL3Q14576 367 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 HNRNPA1L2Q32P51 320 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 FAM46CQ5VWP2 391 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 CNSTQ6PJW8 725 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 SLC41A1Q8IVJ1 513 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 GPATCH11Q8N954 259 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 OR2A12Q8NGT7 310 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 OR8D1Q8WZ84 308 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 INPP5DQ92835 1189 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 ASIC4Q96FT7 647 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 VPS35Q96QK1 796 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 KLF6Q99612 283 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 ZSCAN5AQ9BUG6 496 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 S1PR5Q9H228 398 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 P2RY12Q9H244 342 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 IGSF5Q9NSI5 407 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 TMEM45AQ9NWC5 275 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 DHRS7Q9Y394 339 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 WNT6Q9Y6F9 365 aa6.81□□□□□ -1.32
ECHDC1-210ENST00000454859 PLXNB3Q9ULL4 1909 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 GLYATL1P3A0A0U1RQE8 302 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 C1orf232A0A0U1RR37 186 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 TRPC5OSA6NMA1 111 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 CFAP99D6REC4 459 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 PER2O15055 1255 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 KLK8O60259 260 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 KERAO60938 352 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 TULP3O75386 442 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 DNAJC8O75937 253 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ZNF37AP17032 561 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 BGNP21810 368 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 HNF1BP35680 557 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 MNAT1P51948 309 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 IL2P60568 153 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 NTHL1P78549 312 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 PLOD1Q02809 727 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 PEX6Q13608 980 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 RUNX3Q13761 415 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ARHGEF7Q14155 803 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ITPRIPL2Q3MIP1 535 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ATXN7L2Q5T6C5 722 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ASTLQ6HA08 431 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 FAM109BQ6ICB4 259 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 SYCE2Q6PIF2 218 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 DPY19L3Q6ZPD9 716 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 KDELC2Q7Z4H8 507 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 CMC1Q7Z7K0 106 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 CAMK1DQ8IU85 385 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 FSTL5Q8N475 847 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 TMEM151AQ8N4L1 468 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 TERB1Q8NA31 727 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 OR13C4Q8NGS5 318 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 MAGEB10Q96LZ2 347 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 NSMCE3Q96MG7 304 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 CCDC28BQ9BUN5 200 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 HDAC8Q9BY41 377 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 CLPBQ9H078 707 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 LINC00597Q9H2U6 94 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 BRD9Q9H8M2 597 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 FBXO6Q9NRD1 293 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ZDHHC3Q9NYG2 299 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 TRMT6Q9UJA5 497 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 TNPO3Q9Y5L0 923 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 MKI67P46013 3256 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 CKAP5Q14008 2032 aa6.8□□□□□ -1.32
ECHDC1-210ENST00000454859 ERICH4A6NGS2 130 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CCDC85CA6NKD9 419 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 FOXO6A8MYZ6 492 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SLC16A5O15375 505 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 AP1G1O43747 822 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 IPO13O94829 963 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ENO2P09104 434 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 LAMP2P13473 410 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 IMPDH1P20839 514 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 DGKAP23743 735 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ACRV1P26436 265 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PRDX6P30041 224 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ABL2P42684 1182 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SPINT3P49223 89 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 BNIP1Q12981 228 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 IFT88Q13099 833 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 AGERQ15109 404 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 LRIT3Q3SXY7 679 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 LDLRAP1Q5SW96 308 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CRTC1Q6UUV9 634 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 RNF165Q6ZSG1 346 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 LYSMD3Q7Z3D4 306 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TRMT11Q7Z4G4 463 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ADAMTSL2Q86TH1 951 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 C10orf107Q8IVU9 208 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CEP97Q8IW35 865 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 NXPE1Q8N323 547 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms