RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 VAMP7P51809 220 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 TDGF1P3P51864 188 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 NDST2P52849 883 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 RCAN1P53805 252 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 OTUD4Q01804 1114 aaKnown RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 GUCY1A3Q02108 690 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 PAK1Q13153 545 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 IL10RAQ13651 578 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 LLGL1Q15334 1064 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 ELOCQ15369 112 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 AMZ1Q400G9 498 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 MAP9Q49MG5 647 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 EARS2Q5JPH6 523 aaKnown RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 FAXCQ5TGI0 409 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 C16orf47Q6ZP98 133 aaPredicted RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 NCCRP1Q6ZVX7 275 aaPredicted RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 CAMKMTQ7Z624 323 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 NEK8Q86SG6 692 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 FAM129CQ86XR2 697 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 SIMC1Q8NDZ2 872 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 CCDC148Q8NFR7 591 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 INTS4Q96HW7 963 aaKnown RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNF560Q96MR9 790 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 SPAG5Q96R06 1193 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 RUFY1Q96T51 708 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 PLCD4Q9BRC7 762 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 EDEM3Q9BZQ6 932 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 ILKAPQ9H0C8 392 aaPredicted RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 ACTL8Q9H568 366 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 AKIRIN1Q9H9L7 192 aaPredicted RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 ZBTB20Q9HC78 741 aaPredicted RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 TLR8Q9NR97 1041 aaKnown RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 GPR83Q9NYM4 423 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 NDOR1Q9UHB4 597 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 IPO11Q9UI26 975 aaKnown RBP5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 SCML2Q9UQR0 700 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 HERC2O95714 4834 aa5.29□□□□□ -1.56
SBDSP1-204ENST00000453858 OR14I1A6ND48 311 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 GOLGA6L3A6NEY3 463 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 A6NL46 340 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 C22orf46C9J442 243 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 F5H423 210 aaPredicted RBP5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNF185O15231 689 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 HIP1RO75146 1068 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 TACC1O75410 805 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 JRKO75564 520 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 CTAG2O75638 210 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 BEST1O76090 585 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 KIF20AO95235 890 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 FUCA1P04066 466 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 ASLP04424 464 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 TRIM49P0CI25 452 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 TRIM49CP0CI26 452 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 DNASE1P24855 282 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 RPA1P27694 616 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 TRHRP34981 398 aaPredicted RBP5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 BCL6P41182 706 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 ACOT2P49753 483 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 HK3P52790 923 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 ST8SIA6P61647 398 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 COG7P83436 770 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 POU5F1Q01860 360 aaKnown RBP5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 DNASE1L3Q13609 305 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 ARHGEF7Q14155 803 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 FSCBQ5H9T9 825 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 MPP7Q5T2T1 576 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 VWA5B1Q5TIE3 1220 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 NKAIN2Q5VXU1 208 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 KCTD16Q68DU8 428 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 PAQR3Q6TCH7 311 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 MTDHQ86UE4 582 aaKnown RBP5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 FIBINQ8TAL6 211 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 PLEKHO2Q8TD55 490 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 FAM168AQ92567 244 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 TMA16Q96EY4 203 aaKnown RBP5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 CGRRF1Q99675 332 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 C19orf24Q9BVV8 132 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 RNF32Q9H0A6 362 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 CHMP4BQ9H444 224 aaKnown RBP5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 DPEP3Q9H4B8 488 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 C17orf75Q9HAS0 396 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 TNFRSF12AQ9NP84 129 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 PRKAB1Q9Y478 270 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 CSAG2Q9Y5P2 127 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 COL7A1Q02388 2944 aa5.28□□□□□ -1.56
SBDSP1-204ENST00000453858 ABCA1O95477 2261 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 DYSFO75923 2080 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 USF3Q68DE3 2245 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 FRMD3A2A2Y4 597 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 GOLGA8BA8MQT2 603 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 C21orf140B9A014 251 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 HHLA1C9JL84 531 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 PPP1R12AO14974 1030 aaPredicted RBP5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 MCF2LO15068 1137 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 IFNA2P01563 188 aa5.27□□□□□ -1.57
SBDSP1-204ENST00000453858 CTSLP07711 333 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms