RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 CLIC5Q9NZA1 410 aa3.99□□□□□ -1.77
VPS8-211ENST00000452140 OR14J1Q9UGF5 321 aa3.99□□□□□ -1.77
VPS8-211ENST00000452140 CHORDC1Q9UHD1 332 aaPredicted RBP3.99□□□□□ -1.77
VPS8-211ENST00000452140 PTRH2Q9Y3E5 179 aaKnown RBP3.99□□□□□ -1.77
VPS8-211ENST00000452140 CMAHPQ9Y471 501 aa3.99□□□□□ -1.77
VPS8-211ENST00000452140 CDRT15L2A8MXV6 281 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 M0QZ24 198 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 KCNJ13O60928 360 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 TMCC2O75069 709 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 SELLP14151 372 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 UBA1P22314 1058 aaKnown RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 ACADLP28330 430 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 CSNK2A1P68400 391 aaPredicted RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 ZBED6P86452 979 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 TFAP4Q01664 338 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 AIMP2Q13155 320 aaKnown RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 BECN1Q14457 450 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 PLCB4Q15147 1175 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 AMZ1Q400G9 498 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 SOWAHCQ53LP3 525 aaPredicted RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 ZNF805Q5CZA5 627 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 XKR9Q5GH70 373 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 MFSD4BQ5TF39 518 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 KCTD18Q6PI47 426 aaPredicted RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 DLK2Q6UY11 383 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 CACNA2D4Q7Z3S7 1137 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 SCYL3Q8IZE3 742 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 FBXL14Q8N1E6 418 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 BEST3Q8N1M1 668 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 SCML4Q8N228 414 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 PCDH20Q8N6Y1 951 aaKnown RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 IL17RCQ8NAC3 791 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 HM13Q8TCT9 377 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 NSMCE1Q8WV22 266 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 FEM1CQ96JP0 617 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 PCYT2Q99447 389 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 PAFAH2Q99487 392 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 CMKLR1Q99788 373 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 HRH4Q9H3N8 390 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 FBXW11Q9UKB1 542 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 PADI3Q9ULW8 664 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 PCDHA7Q9UN72 937 aa3.98□□□□□ -1.77
VPS8-211ENST00000452140 SETD1BQ9UPS6 1966 aaKnown RBP3.98□□□□□ -1.77
VPS8-211ENST00000452140 ARHGEF40Q8TER5 1519 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 A0A1W2PR77 199 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 CPED1A4D0V7 1026 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 FAM90A10PA6NDY2 464 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 P4HA2O15460 535 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 PLPP2O43688 288 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 GPC4O75487 556 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 ERAL1O75616 437 aaKnown RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 PRSS2P07478 247 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 ACAA1P09110 424 aaPredicted RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 HOXC6P09630 235 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 MMP9P14780 707 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 DDX5P17844 614 aaKnown RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 HOXC9P31274 260 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 KRT20P35900 424 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 MSH2P43246 934 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 HTR6P50406 440 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 PDLIM4P50479 330 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 SUOXP51687 545 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 GPR143P51810 404 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 HNRNPH2P55795 449 aaKnown RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 IFI35P80217 286 aaPredicted RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 ECT2LQ008S8 904 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 FOXM1Q08050 763 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 GRSF1Q12849 480 aaKnown RBP eCLIP3.97□□□□□ -1.77
VPS8-211ENST00000452140 LRMPQ12912 555 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 DLG2Q15700 870 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 SETMARQ53H47 684 aaPredicted RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 BMP2KLQ5H9B9 411 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 KCNT1Q5JUK3 1230 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 NSUN5P2Q63ZY6 315 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 RGMBQ6NW40 437 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 C8orf82Q6P1X6 216 aaPredicted RBP3.97□□□□□ -1.77
VPS8-211ENST00000452140 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 TSPAN33Q86UF1 283 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 KBTBD6Q86V97 674 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 OR8H2Q8N162 312 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 ACVR1CQ8NER5 493 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 OR1J2Q8NGS2 313 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 B4GALNT2Q8NHY0 566 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 ZBTB9Q96C00 473 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 C3orf30Q96M34 536 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 SH3GL2Q99962 352 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 EPB41L5Q9HCM4 733 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 LTB4R2Q9NPC1 389 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 PLSCR4Q9NRQ2 329 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 NRBP1Q9UHY1 535 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 PADI1Q9ULC6 663 aa3.97□□□□□ -1.77
VPS8-211ENST00000452140 ATXN2Q99700 1313 aaKnown RBP3.96□□□□□ -1.77
VPS8-211ENST00000452140 OR2A25A4D2G3 310 aa3.96□□□□□ -1.78
VPS8-211ENST00000452140 EIF4E1BA6NMX2 242 aaKnown RBP3.96□□□□□ -1.78
VPS8-211ENST00000452140 SPINT2O43291 252 aa3.96□□□□□ -1.78
VPS8-211ENST00000452140 ADAM20O43506 726 aa3.96□□□□□ -1.78
VPS8-211ENST00000452140 MITFO75030 526 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms