RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 GPR63Q9BZJ6 419 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 EHD1Q9H4M9 534 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 C3orf18Q9UK00 162 aa12.37□□□□□ -0.43
UBE3B-204ENST00000449510 POLR3HQ9Y535 204 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-204ENST00000449510 SLIT2O94813 1529 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 KPNA6O60684 536 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TNFRSF21O75509 655 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 CLPXO76031 633 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 MED26O95402 600 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 IRF1P10914 325 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 UFM1P61960 85 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 DSC2Q02487 901 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TSNQ15631 228 aaKnown RBP12.36□□□□□ -0.43
UBE3B-204ENST00000449510 GRIK4Q16099 956 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 DET1Q7L5Y6 550 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TRPV3Q8NET8 790 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 PROX1Q92786 737 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 GLOD4Q9HC38 313 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TAS2R13Q9NYV9 303 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE3B-204ENST00000449510 USP22Q9UPT9 525 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 hCG_2039718K7EN88 272 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 NDUFS2O75306 463 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 LGALS2P05162 132 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
UBE3B-204ENST00000449510 NFATC3Q12968 1075 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 PLA2G4EQ3MJ16 856 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 LPCAT1Q8NF37 534 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 HSFY1Q96LI6 401 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TSSK3Q96PN8 268 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 HOPXQ9BPY8 73 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-204ENST00000449510 UGT2B28Q9BY64 529 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 ACTR8Q9H981 624 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 PRDM8Q9NQV8 689 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 OLAHQ9NV23 265 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 GALPQ9UBC7 116 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 EIF3LQ9Y262 564 aaKnown RBP12.36□□□□□ -0.43
UBE3B-204ENST00000449510 TPRKBQ9Y3C4 175 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 PCDHGA7Q9Y5G6 932 aa12.36□□□□□ -0.43
UBE3B-204ENST00000449510 MYBPHLA2RUH7 354 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 HTR3EA5X5Y0 456 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 FAM189A1O60320 539 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 VPS26AO75436 327 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 GABBR2O75899 941 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 OR4F21O95013 312 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 OPRL1P41146 370 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 RAP1GAP2Q684P5 730 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 SLC27A1Q6PCB7 646 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 STRADAQ7RTN6 431 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 CCDC117Q8IWD4 279 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 OR52J3Q8NH60 311 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 TRPV5Q9NQA5 729 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 USE1Q9NZ43 259 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 SUCOQ9UBS9 1254 aaKnown RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 FZD10Q9ULW2 581 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 WDR37Q9Y2I8 494 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 DCCP43146 1447 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 NUP214P35658 2090 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ARID1BQ8NFD5 2236 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 PGK1P00558 417 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ANXA6P08133 673 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 GLDCP23378 1020 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ATP6V1E1P36543 226 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 NR4A2P43354 598 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 POLR2JP52435 117 aaKnown RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 BNIP2Q12982 314 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MOGQ16653 247 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF534Q76KX8 674 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 GPSM1Q86YR5 675 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 SLC15A3Q8IY34 581 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 KDM1BQ8NB78 822 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 GPR20Q99678 358 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MYOCQ99972 504 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MRIQ9BWK5 157 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 GBA3Q9H227 469 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 OGDHLQ9ULD0 1010 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF510Q9Y2H8 683 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 CBX4O00257 560 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 TLR5O60602 858 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ZNF26P17031 533 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 GTF2E2P29084 291 aaKnown RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MAP2K4P45985 399 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 PPIL2Q13356 520 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 PRAMEF19Q5SWL8 479 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 CIR1Q86X95 450 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 ST13P5Q8NFI4 369 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-204ENST00000449510 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 RAB2BQ8WUD1 216 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 TEKT5Q96M29 485 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms