RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 STMN2Q93045 179 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 PTERQ96BW5 349 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 LENG8Q96PV6 779 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 EML4Q9HC35 981 aaKnown RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 TDP1Q9NUW8 608 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 POLR3BQ9NW08 1133 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 A0A088AWK7 358 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 F8W8V4 182 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CIB2O75838 187 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 KRT36O76013 467 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CYBBP04839 570 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CDKN1CP49918 316 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CCNG1P51959 295 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 SULT2A1Q06520 285 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 PDAP1Q13442 181 aaKnown RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 RCN1Q15293 331 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 TRMT5Q32P41 509 aaKnown RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 ARHGAP15Q53QZ3 475 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 RALGPS1Q5JS13 557 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 NXNQ6DKJ4 435 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 RPS27LQ71UM5 84 aaKnown RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 ADGRD2Q7Z7M1 963 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 RYBPQ8N488 228 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 LPGAT1Q92604 370 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 LMLNQ96KR4 655 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CCDC28BQ9BUN5 200 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 TRPC5OSA6NMA1 111 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 ALPIP09923 528 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 CEBPBP17676 345 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PFKLP17858 780 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 IMPDH1P20839 514 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PPARGP37231 505 aaPredicted RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PEX6Q13608 980 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PITRM1Q5JRX3 1037 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PRSS36Q5K4E3 855 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 DGKKQ5KSL6 1271 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 C12orf76Q8N812 135 aaPredicted RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 TCF12Q99081 682 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 FKBPLQ9UIM3 349 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 G3BP2Q9UN86 482 aaKnown RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 FZD6O60353 706 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 NDUFS3O75489 264 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 ZNF821O75541 412 aaPredicted RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PSMG1O95456 288 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PENKP01210 267 aaPredicted RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 FMO4P31512 558 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PTDSS1P48651 473 aaKnown RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 GALNT1Q10472 559 aaPredicted RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 CUL3Q13618 768 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 FUT11Q495W5 492 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 C1orf146Q5VVC0 180 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 TMEM198Q66K66 360 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 RIPOR1Q6ZS17 1223 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 CUZD1Q86UP6 607 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 CPSF7Q8N684 471 aaKnown RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 ACDQ96AP0 544 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 MAELQ96JY0 434 aaKnown RBP16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 PANX3Q96QZ0 392 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 CCDC68Q9H2F9 335 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 TAS2R13Q9NYV9 303 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 FAM50BQ9Y247 325 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 FIS1Q9Y3D6 152 aa16.03■□□□□ 0.16
AP000253.1-201ENST00000449339 TRANK1O15050 2925 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 DDX6P26196 483 aaKnown RBP eCLIP16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 PIK3R1P27986 724 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 EPHB1P54762 984 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 ACTR3P61158 418 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 NFKB2Q00653 900 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 GPM6BQ13491 265 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 ZNF678Q5SXM1 525 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 TTC30BQ8N4P2 665 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 ACTRT2Q8TDY3 377 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 L3HYPDHQ96EM0 354 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 MYO19Q96H55 970 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 FAR2Q96K12 515 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 CATSPER2Q96P56 530 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 TRMOQ9BU70 441 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 GSTO2Q9H4Y5 243 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 ZNF385DQ9H6B1 395 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 TNFRSF12AQ9NP84 129 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 MED16Q9Y2X0 877 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.16
AP000253.1-201ENST00000449339 H3BMM5 538 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 TRIM24O15164 1050 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 SLC22A2O15244 555 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 STX7O15400 261 aaKnown RBP16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 BNIP3LO60238 219 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 XYLBO75191 536 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 SMIM24O75264 130 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 SKAP2O75563 359 aaPredicted RBP16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 SRP72O76094 671 aaKnown RBP16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 RHOBTB1O94844 696 aa16.02■□□□□ 0.15
AP000253.1-201ENST00000449339 SUPT7LO94864 414 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms