RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CCDC154A6NI56 674 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 PPEF1O14829 653 aaPredicted RBP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TLL1O43897 1013 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 PLIN3O60664 434 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 BMP3P12645 472 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CD1EP15812 388 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 SYN1P17600 705 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CNTFP26441 200 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 GMPRP36959 345 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 HNF4AP41235 474 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 GDI2P50395 445 aaKnown RBP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 ARPP19P56211 112 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 GTF2IP78347 998 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 FMO1Q01740 532 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 FADDQ13158 208 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 PCBP1Q15365 356 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 ECM1Q16610 540 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CBWD6Q4V339 395 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CBWD3Q5JTY5 395 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CBWD5Q5RIA9 395 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TPRG1LQ5T0D9 272 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 GPATCH4Q5T3I0 446 aaKnown RBP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 RNF180Q86T96 592 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 IGDCC3Q8IVU1 814 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 SLFN12Q8IYM2 578 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 ZMIZ2Q8NF64 920 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 GANCQ8TET4 914 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 LPPQ93052 612 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 C11orf24Q96F05 449 aaPredicted RBP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 ARL5BQ96KC2 179 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TBATAQ96M53 351 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 SH2D3AQ9BRG2 576 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 CINPQ9BW66 212 aaPredicted RBP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 BCL2L14Q9BZR8 327 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TOR3AQ9H497 397 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TRIM45Q9H8W5 580 aaPredicted RBP10.72□□□□□ -0.69
LINC00342-202ENST00000448494 SPAG4Q9NPE6 437 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TBC1D13Q9NVG8 400 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 EVA1BQ9NVM1 165 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 TRHDEQ9UKU6 1024 aa10.72□□□□□ -0.69
LINC00342-202ENST00000448494 A0A1B0GVM2 712 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 CCDC182A6NF36 153 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 E5RI56 91 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 NRP1O14786 923 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 AXIN1O15169 862 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SSX4O60224 188 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 ADAMTS4O75173 837 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 KRT19P08727 400 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 ZP3P21754 424 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 CHRNA5P30532 468 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SHMT2P34897 504 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SLC15A1P46059 708 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 MEOX2P50222 304 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 RBP5P82980 135 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 CDH17Q12864 832 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 AAK1Q2M2I8 961 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 IQCCQ4KMZ1 466 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SETMARQ53H47 684 aaPredicted RBP10.71□□□□□ -0.69
LINC00342-202ENST00000448494 ZMAT1Q5H9K5 638 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 DENND5AQ6IQ26 1287 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 TAF2Q6P1X5 1199 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 CYP2R1Q6VVX0 501 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 NRARPQ7Z6K4 114 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 NKAIN4Q8IVV8 208 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 UNC5BQ8IZJ1 945 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 OR52N1Q8NH53 320 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 LMO3Q8TAP4 145 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 TBCKQ8TEA7 893 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SLC22A17Q8WUG5 538 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SIGLEC10Q96LC7 697 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 NODALQ96S42 347 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 FAM49AQ9H0Q0 323 aaPredicted RBP10.71□□□□□ -0.69
LINC00342-202ENST00000448494 LDAHQ9H6V9 325 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 CYP3A43Q9HB55 503 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 C6orf50Q9HD87 102 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 UBE2TQ9NPD8 197 aaPredicted RBP10.71□□□□□ -0.69
LINC00342-202ENST00000448494 KCNQ5Q9NR82 932 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 POLE3Q9NRF9 147 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 TBC1D22BQ9NU19 505 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 INTS10Q9NVR2 710 aaKnown RBP10.71□□□□□ -0.69
LINC00342-202ENST00000448494 HPF1Q9NWY4 346 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 SLC23A1Q9UHI7 598 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 RAPGEFL1Q9UHV5 662 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 PFDN2Q9UHV9 154 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 ZNF639Q9UID6 485 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 EMCNQ9ULC0 261 aa10.71□□□□□ -0.69
LINC00342-202ENST00000448494 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.7
LINC00342-202ENST00000448494 BAZ2AQ9UIF9 1905 aaKnown RBP10.71□□□□□ -0.7
LINC00342-202ENST00000448494 DHRS12A0PJE2 317 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 PQLC2LA1A4F0 135 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 PRORSD1PA6NEY8 169 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 BTN3A3O00478 584 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 SGPL1O95470 568 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 IFNB1P01574 187 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 CDK1P06493 297 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 HSMCR30P0CW71 290 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 ITGB6P18564 788 aa10.7□□□□□ -0.7
LINC00342-202ENST00000448494 HLA-DMAP28067 261 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms