RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 IGSF21Q96ID5 467 aa14.76□□□□□ -0.05
SF1-211ENST00000448404 PSKH2Q96QS6 385 aa14.76□□□□□ -0.05
SF1-211ENST00000448404 RANBP9Q96S59 729 aa14.76□□□□□ -0.05
SF1-211ENST00000448404 YIPF1Q9Y548 306 aa14.76□□□□□ -0.05
SF1-211ENST00000448404 H0Y626 953 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 NPHS1O60500 1241 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 GPC4O75487 556 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 EEF1DP29692 281 aaKnown RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 ARL1P40616 181 aaPredicted RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 MAPKAPK2P49137 400 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 ZNF140P52738 457 aaPredicted RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 YBEYP58557 167 aaPredicted RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 DSG1Q02413 1049 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CREB5Q02930 508 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 MMEL1Q495T6 779 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 METTL21CQ5VZV1 264 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CCDC117Q8IWD4 279 aaPredicted RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 GALNT4Q8N4A0 578 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 VWCEQ96DN2 955 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 TDRD1Q9BXT4 1180 aaKnown RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 RNF208Q9H0X6 261 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 TNKS2Q9H2K2 1166 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CWH43Q9H720 699 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 AKTIPQ9H8T0 292 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 SEPT3Q9UH03 358 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 VPS28Q9UK41 221 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 LRCH1Q9Y2L9 728 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 BTN3A1O00481 513 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 HLA-DPA1P20036 260 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CAPRIN1Q14444 709 aaKnown RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 PIGGQ5H8A4 983 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 SLC8B1Q6J4K2 584 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 MRNIPQ6NTE8 343 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 KBTBD6Q86V97 674 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 SPATA24Q86W54 205 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CPNE9Q8IYJ1 553 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 PELI3Q8N2H9 469 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 RP9Q8TA86 221 aaKnown RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 EEF1AKMT1Q8WVE0 214 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 EZH1Q92800 747 aaPredicted RBP14.75□□□□□ -0.05
SF1-211ENST00000448404 ITFG2Q969R8 447 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CNDP1Q96KN2 507 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 TRIM4Q9C037 500 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 TRPM5Q9NZQ8 1165 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 MTRRQ9UBK8 725 aa14.75□□□□□ -0.05
SF1-211ENST00000448404 CLASP2O75122 1294 aaKnown RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 NDUFS3O75489 264 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 ZNF189O75820 626 aaPredicted RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 PAPSS2O95340 614 aaPredicted RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 RBP1P09455 135 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 IMPDH1P20839 514 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 DIO3P55073 304 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 DNAJB7Q7Z6W7 309 aaPredicted RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 LRRC43Q8N309 656 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 TSEN34Q9BSV6 310 aaKnown RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 AARSD1Q9BTE6 412 aaKnown RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 BOCQ9BWV1 1114 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 KRT87PA6NCN2 255 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 H7C4K7 107 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 PSMD12O00232 456 aaPredicted RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 ECI2O75521 394 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 ACRP10323 421 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 CR2P20023 1033 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 ITGB8P26012 769 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 CSKP41240 450 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 RANBP1P43487 201 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 VEGFBP49765 207 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 CDH4P55283 916 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 PLIN5Q00G26 463 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 KIF19Q2TAC6 998 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 VPS26BQ4G0F5 336 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 FAM45BPQ6NSW5 357 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 FBXL19Q6PCT2 694 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 RETREG3Q86VR2 466 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 FUNDC1Q8IVP5 155 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 DRAXINQ8NBI3 349 aaPredicted RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 B4GALNT2Q8NHY0 566 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 FAM45AQ8TCE6 357 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 PXYLP1Q8TE99 480 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 LPGAT1Q92604 370 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 ATP6V1E2Q96A05 226 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 TSPAN17Q96FV3 270 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 MAELQ96JY0 434 aaKnown RBP14.74□□□□□ -0.05
SF1-211ENST00000448404 BIRC8Q96P09 236 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 C1orf50Q9BV19 199 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 PIF1Q9H611 641 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 VTI1BQ9UEU0 232 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 ASB3Q9Y575 518 aa14.74□□□□□ -0.05
SF1-211ENST00000448404 NR5A2O00482 541 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 KDELR3O43731 214 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 F11P03951 625 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ATP5BP06576 529 aaKnown RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 DNAJB13P59910 316 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PTK2BQ14289 1009 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 UGT3A2Q3SY77 523 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ADGRF1Q5T601 910 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 FOXB2Q5VYV0 432 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 FAM151BQ6UXP7 276 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 LYSMD3Q7Z3D4 306 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms