RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CSF3RQ99062 836 aa18.89■□□□□ 0.61
PMPCB-204ENST00000444457 SLC25A23Q9BV35 468 aa18.89■□□□□ 0.61
PMPCB-204ENST00000444457 SMPD3Q9NY59 655 aaPredicted RBP18.89■□□□□ 0.61
PMPCB-204ENST00000444457 CCDC167Q9P0B6 97 aa18.89■□□□□ 0.61
PMPCB-204ENST00000444457 DNMT3BQ9UBC3 853 aaKnown RBP18.89■□□□□ 0.61
PMPCB-204ENST00000444457 AURKCQ9UQB9 309 aa18.89■□□□□ 0.61
PMPCB-204ENST00000444457 KCNH1O95259 989 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 SAT1P21673 171 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 HOXC13P31276 330 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 YAP1P46937 504 aaKnown RBP18.88■□□□□ 0.61
PMPCB-204ENST00000444457 INPP5AQ14642 412 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 USP10Q14694 798 aaKnown RBP18.88■□□□□ 0.61
PMPCB-204ENST00000444457 BRMS1LQ5PSV4 323 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 GTF2IRD2BQ6EKJ0 949 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 PKN3Q6P5Z2 889 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 GTF2IRD2Q86UP8 949 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 SERINC5Q86VE9 423 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 GOLM1Q8NBJ4 401 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 TRPV1Q8NER1 839 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 IL12RB2Q99665 862 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 KLHL25Q9H0H3 589 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 GMPR2Q9P2T1 348 aaKnown RBP18.88■□□□□ 0.61
PMPCB-204ENST00000444457 MYO16Q9Y6X6 1858 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 DYTNA2CJ06 578 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 PHGDHO43175 533 aaKnown RBP18.88■□□□□ 0.61
PMPCB-204ENST00000444457 NRP2O60462 931 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 DLX3O60479 287 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 NPHS1O60500 1241 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 MGEA5O60502 916 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 IL10P22301 178 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 POU6F1Q14863 301 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 C17orf99Q6UX52 265 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 CMTR2Q8IYT2 770 aaKnown RBP18.88■□□□□ 0.61
PMPCB-204ENST00000444457 TTC30BQ8N4P2 665 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 IPMKQ8NFU5 416 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 DHRS1Q96LJ7 313 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 TSNARE1Q96NA8 513 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 TRIM15Q9C019 465 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 WDR12Q9GZL7 423 aaKnown RBP18.88■□□□□ 0.61
PMPCB-204ENST00000444457 GLOD4Q9HC38 313 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 HMG20AQ9NP66 347 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 ANKMY1Q9P2S6 941 aa18.88■□□□□ 0.61
PMPCB-204ENST00000444457 M0QZQ0 153 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 EI24O14681 340 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 MAFKO60675 156 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 ANXA9O76027 345 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 AHSGP02765 367 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 SLC35E2BP0CK96 405 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 TGM1P22735 817 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 NEK2P51955 445 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 PGGT1BP53609 377 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 XAF1Q6GPH4 301 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 CNTN4Q8IWV2 1026 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 FSTL5Q8N475 847 aaPredicted RBP18.87■□□□□ 0.61
PMPCB-204ENST00000444457 FICDQ9BVA6 458 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 HERC2P3Q9BVR0 1158 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 EHD1Q9H4M9 534 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 AKIP1Q9NQ31 210 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 DSEQ9UL01 958 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 ST14Q9Y5Y6 855 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 TTC3P53804 2025 aa18.87■□□□□ 0.61
PMPCB-204ENST00000444457 FGF10O15520 208 aaPredicted RBP18.86■□□□□ 0.61
PMPCB-204ENST00000444457 ZNF623O75123 536 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 PAGE1O75459 146 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 PSMA4P25789 261 aaKnown RBP18.86■□□□□ 0.61
PMPCB-204ENST00000444457 CD52P31358 61 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 AVPR1AP37288 418 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 GLRBP48167 497 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 ATP6V0D1P61421 351 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 BFSP2Q13515 415 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 PERM1Q5SV97 790 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 LDLRAP1Q5SW96 308 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 MANEALQ5VSG8 457 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 DENND5AQ6IQ26 1287 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 LAYNQ6UX15 382 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 NRBF2Q96F24 287 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 SCYL1Q96KG9 808 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 SLC39A8Q9C0K1 460 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 CATSPERBQ9H7T0 1116 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 PADI3Q9ULW8 664 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 SLC27A5Q9Y2P5 690 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 UBDO15205 165 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 MATN3O15232 486 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
PMPCB-204ENST00000444457 NDUFB5O43674 189 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 UGT2B4P06133 528 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 HTR7P34969 479 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 RCVRNP35243 200 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 ADARB1P78563 741 aaKnown RBP18.86■□□□□ 0.61
PMPCB-204ENST00000444457 SLC12A1Q13621 1099 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 UGP2Q16851 508 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 PITRM1Q5JRX3 1037 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 BTBD8Q5XKL5 378 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 OVOS1Q6IE37 1185 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 ANKRD13BQ86YJ7 626 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 SLC41A1Q8IVJ1 513 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 SNX31Q8N9S9 440 aa18.86■□□□□ 0.61
PMPCB-204ENST00000444457 BPIFB6Q8NFQ5 453 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms