RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 LACRTQ9GZZ8 138 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 SUDS3Q9H7L9 328 aaPredicted RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 POLR1BQ9H9Y6 1135 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 ZFYVE1Q9HBF4 777 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 MAGEE1Q9HCI5 957 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 PKD2L2Q9NZM6 624 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 TAAR2Q9P1P5 351 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 APPL1Q9UKG1 709 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 TMEM98Q9Y2Y6 226 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 A0A1W2PNU3 283 aaPredicted RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 A0A1W2PQM1 296 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 APOC4-APOC2K7ER74 178 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 PJA2O43164 708 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 NUDT21O43809 227 aaKnown RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 APOC2P02655 101 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 FGF1P05230 155 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 AK4P27144 223 aaPredicted RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 ACTN2P35609 894 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 ADCY8P40145 1251 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 VAV2P52735 878 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 COPS2P61201 443 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 CTBSQ01459 385 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 PCSK7Q16549 785 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 PYCR3Q53H96 274 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 C19orf48Q6RUI8 117 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 IGF2-ASQ6U949 168 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 C17orf82Q86X59 251 aaPredicted RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 ACRBPQ8NEB7 543 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 HAUS1Q96CS2 278 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 QKIQ96PU8 341 aaKnown RBP eCLIP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 OR2M4Q96R27 311 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 VAT1Q99536 393 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 BAG1Q99933 345 aaPredicted RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 CDH19Q9H159 772 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 SYNDIG1Q9H7V2 258 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 VPS18Q9P253 973 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 RALYQ9UKM9 306 aaKnown RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 CNOT6Q9ULM6 557 aaKnown RBP13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 EFR3BQ9Y2G0 817 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 PCDHA3Q9Y5H8 950 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 RNF215Q9Y6U7 377 aa13.58□□□□□ -0.24
AP001062.3-202ENST00000444409 ARHGEF17Q96PE2 2063 aaPredicted RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 ADAMTS20P59510 1910 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 FADS2P1A8MWK0 482 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 HACD1B0YJ81 288 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 D6RAR5 112 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 INPP4BO15327 924 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 PMPCBO75439 489 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 NDST3O95803 873 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 RPLP0P05388 317 aaKnown RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 PIRTP0C851 137 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 NFKB1P19838 968 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 CTNNA2P26232 953 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 CDC25BP30305 580 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 PTPN7P35236 360 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 DCDC1P59894 354 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 CCL7P80098 99 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 XRCC4Q13426 336 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 PEX6Q13608 980 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 C3orf38Q5JPI3 329 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 SLC30A9Q6PML9 568 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 TMC3Q7Z5M5 1100 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 SPRED1Q7Z699 444 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 CCNJLQ8IV13 435 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 LRRC57Q8N9N7 239 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 ZDHHC1Q8WTX9 485 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 HTR3CQ8WXA8 447 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 ZNF578Q96N58 590 aaPredicted RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 GFM1Q96RP9 751 aaKnown RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 SRPK1Q96SB4 655 aaKnown RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 HEMGNQ9BXL5 484 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 LRRN3Q9H3W5 708 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 ASCL3Q9NQ33 180 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 UBP1Q9NZI7 540 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 LRIT1Q9P2V4 623 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 IMPACTQ9P2X3 320 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 NFKBIL1Q9UBC1 381 aaPredicted RBP13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 FAM153AQ9UHL3 310 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 SATB2Q9UPW6 733 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 SHOC2Q9UQ13 582 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 ZNF711Q9Y462 761 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
AP001062.3-202ENST00000444409 IGSF10Q6WRI0 2623 aa13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 LOC285095A0A1B0GVY8 99 aa13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 GRID2IPA4D2P6 1211 aa13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 DNAJC6O75061 913 aa13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 EPOP01588 193 aa13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 ATP1A1P05023 1023 aaKnown RBP13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 ACTR1BP42025 376 aa13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 MAZP56270 477 aaKnown RBP13.56□□□□□ -0.24
AP001062.3-202ENST00000444409 ERVPABLB-1P60509 514 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms