RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 TIAL1Q01085 375 aaKnown RBP eCLIP18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 FOXD4Q12950 439 aaPredicted RBP18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 MAPRE2Q15555 327 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 LDLRAP1Q5SW96 308 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 SLC2A7Q6PXP3 512 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 CARM1Q86X55 608 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 HS3ST5Q8IZT8 346 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 SIDT2Q8NBJ9 832 aaKnown RBP18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 NSMCE3Q96MG7 304 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 ERVK-6Q9BXR3 956 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 CCSER2Q9H7U1 834 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 VPS45Q9NRW7 570 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 LMCD1Q9NZU5 365 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 VPS28Q9UK41 221 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 DOLKQ9UPQ8 538 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 SPO11Q9Y5K1 396 aa18.89■□□□□ 0.61
PAXBP1-204ENST00000443785 C5orf42Q9H799 3197 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 MOXD2PA6NHM9 499 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 GUCA1CO95843 209 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 HSPA8P11142 646 aaKnown RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 SLC6A2P23975 617 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 RFTN1Q14699 578 aaPredicted RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 FAM171BQ6P995 826 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 TMEM26Q6ZUK4 368 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 ADI1Q9BV57 179 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 OSBPL11Q9BXB4 747 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 ZMYM5Q9UJ78 669 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 TRPV2Q9Y5S1 764 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 NUP214P35658 2090 aaPredicted RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 A0A1W2PPW3 197 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 TCRBV3S1A0A5B6 114 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 FXYD1O00168 92 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 GIPC1O14908 333 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 CACNG3O60359 315 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 ELK4P28324 431 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 DNAJB13P59910 316 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 NHSL2Q5HYW2 709 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 TIGD7Q6NT04 549 aaPredicted RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 THEM5Q8N1Q8 247 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 PCYOX1LQ8NBM8 494 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 OR6K2Q8NGY2 324 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 MIPOL1Q8TD10 442 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 LRRC58Q96CX6 371 aa18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 EIF2B4Q9UI10 523 aaKnown RBP18.88■□□□□ 0.61
PAXBP1-204ENST00000443785 CLOCKO15516 846 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 RAMP2O60895 175 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 CD247P20963 164 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 FBXO39Q8N4B4 442 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 OR52B6Q8NGF0 335 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 CALML6Q8TD86 181 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 TCF12Q99081 682 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 POLR1BQ9H9Y6 1135 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 DLGAP1O14490 977 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 PIM1P11309 404 aaPredicted RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 CLCQ05315 142 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 TAF1CQ15572 869 aaPredicted RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 PTPRNQ16849 979 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 C16orf59Q7L2K0 433 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 MILR1Q7Z6M3 343 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 TSPAN17Q96FV3 270 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 PARK7Q99497 189 aaKnown RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 ZYG11BQ9C0D3 744 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 SMOC2Q9H3U7 446 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 RRN3Q9NYV6 651 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 HAS3O00219 553 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 OR4F21O95013 312 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 ATXN1LP0C7T5 689 aaKnown RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 ZNF37AP17032 561 aaPredicted RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 PSMA4P25789 261 aaKnown RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 GSK3BP49841 420 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 HK2P52789 917 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 RPS24P62847 133 aaKnown RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 LIPEQ05469 1076 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 FAM110CQ1W6H9 321 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 ARTNQ5T4W7 220 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 MANEALQ5VSG8 457 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 ARRDC2Q8TBH0 407 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 TBCDQ9BTW9 1192 aa18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 CLK4Q9HAZ1 481 aaKnown RBP18.87■□□□□ 0.61
PAXBP1-204ENST00000443785 GPR182O15218 404 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 FGF10O15520 208 aaPredicted RBP18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 ECI2O75521 394 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 ATE1O95260 518 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 IGLV3-25P01717 112 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 CNPP09543 421 aaKnown RBP18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 IRF1P10914 325 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 CLCN2P51788 898 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 PMS2P3Q13401 168 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 SELPLGQ14242 412 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 GPR141Q7Z602 305 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 RAB44Q7Z6P3 723 aaPredicted RBP18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 FNDC5Q8NAU1 212 aa18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 DRAXINQ8NBI3 349 aaPredicted RBP18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 C12orf43Q96C57 262 aaKnown RBP18.86■□□□□ 0.61
PAXBP1-204ENST00000443785 KCTD14Q9BQ13 255 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms