RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 IPPQ9Y573 584 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 CITO14578 2027 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 TRIP12Q14669 1992 aaPredicted RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 SMIM28A0A1B0GU29 152 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 ARPC2O15144 300 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 GPX3P22352 226 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 ELK4P28324 431 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 HOXC8P31273 242 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 NEK2P51955 445 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 STX1BP61266 288 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 AQP6Q13520 282 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 PAFAH1B3Q15102 231 aaKnown RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 SOWAHAQ2M3V2 549 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 SLC25A52Q3SY17 297 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 RBM48Q5RL73 367 aaKnown RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 CRTC3Q6UUV7 619 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 PDZD4Q76G19 769 aaPredicted RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 CUZD1Q86UP6 607 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 TBC1D21Q8IYX1 336 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 KATNAL1Q9BW62 490 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 MUC13Q9H3R2 512 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 RMND5AQ9H871 391 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 TNFRSF12AQ9NP84 129 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 ST3GAL5Q9UNP4 418 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 NOX1Q9Y5S8 564 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 MSI1O43347 362 aaKnown RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 B4GAT1O43505 415 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 GMNNO75496 209 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 DAB1O75553 588 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 AHSGP02765 367 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 ALBP02768 609 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 STMN1P16949 149 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 PTPN3P26045 913 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 NMBRP28336 390 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 TKTP29401 623 aaKnown RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 CRYBB1P53674 252 aaPredicted RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 IFITM3Q01628 133 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 SKIV2LQ15477 1246 aaKnown RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 CYP51A1Q16850 503 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 UGP2Q16851 508 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 INAVAQ3KP66 663 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 COL13A1Q5TAT6 717 aaPredicted RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 LARP4Q71RC2 724 aaKnown RBP eCLIP11.87□□□□□ -0.51
LTBR-203ENST00000441074 LINC00523Q86TU6 105 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 HOMEZQ8IX15 550 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 BEST2Q8NFU1 509 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 OR6B3Q8NGW1 331 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 CLEC4CQ8WTT0 213 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 MUS81Q96NY9 551 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 CMTM6Q9NX76 183 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 POU2F3Q9UKI9 436 aa11.87□□□□□ -0.51
LTBR-203ENST00000441074 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
LTBR-203ENST00000441074 C16orf96A6NNT2 1141 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 H0Y858 1186 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 LDLRP01130 860 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 UMPSP11172 480 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 LCP1P13796 627 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 RCVRNP35243 200 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 SULT1E1P49888 294 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 GALNT1Q10472 559 aaPredicted RBP11.86□□□□□ -0.51
LTBR-203ENST00000441074 SF3B4Q15427 424 aaKnown RBP eCLIP11.86□□□□□ -0.51
LTBR-203ENST00000441074 MAPRE1Q15691 268 aaKnown RBP11.86□□□□□ -0.51
LTBR-203ENST00000441074 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 PLEKHG7Q6ZR37 379 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 PIWIL3Q7Z3Z3 882 aaKnown RBP11.86□□□□□ -0.51
LTBR-203ENST00000441074 CEP97Q8IW35 865 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 SPARTQ8N0X7 666 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 SPATA6LQ8N4H0 392 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 CCDC126Q96EE4 140 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 FUNDC2Q9BWH2 189 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 DPEP3Q9H4B8 488 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 ATP13A3Q9H7F0 1226 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 SIAEQ9HAT2 523 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 IL1RL2Q9HB29 575 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
LTBR-203ENST00000441074 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 MTRRQ9UBK8 725 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 ENPP5Q9UJA9 477 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 DGKBQ9Y6T7 804 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 CDH23Q9H251 3354 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 A0A087X1B8 175 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 TCRBV5S2A0A599 114 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 KCNK1O00180 336 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 AP3B1O00203 1094 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 INPP4BO15327 924 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 MTSS1O43312 755 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 UGT2B11O75310 529 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 CRHBPP24387 322 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 LMO2P25791 158 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 MRPS6P82932 125 aaKnown RBP11.86□□□□□ -0.51
LTBR-203ENST00000441074 ZNF460Q14592 562 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 PGS1Q32NB8 556 aa11.86□□□□□ -0.51
LTBR-203ENST00000441074 CCSAPQ6IQ19 270 aaPredicted RBP11.86□□□□□ -0.51
LTBR-203ENST00000441074 SLC16A12Q6ZSM3 486 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms