RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 IVLP07476 585 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 ILF3Q12906 894 aaKnown RBP eCLIP23.89■■□□□ 1.413e-7■■□□□ 12.3
CPNE1-217ENST00000439669 CAMK2BQ13554 666 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 PERM1Q5SV97 790 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 HENMT1Q5T8I9 393 aaKnown RBP23.89■■□□□ 1.41
CPNE1-217ENST00000439669 ALS2CLQ60I27 953 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 MARK2Q7KZI7 788 aaKnown RBP23.89■■□□□ 1.41
CPNE1-217ENST00000439669 SLC25A41Q8N5S1 370 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 PDCD7Q8N8D1 485 aaKnown RBP23.89■■□□□ 1.41
CPNE1-217ENST00000439669 HES6Q96HZ4 224 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 WDR24Q96S15 920 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 SRPK1Q96SB4 655 aaKnown RBP23.89■■□□□ 1.41
CPNE1-217ENST00000439669 FSD1LQ9BXM9 530 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 GBA3Q9H227 469 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 CCDC86Q9H6F5 360 aaKnown RBP23.89■■□□□ 1.41
CPNE1-217ENST00000439669 ZMIZ1Q9ULJ6 1067 aa23.89■■□□□ 1.41
CPNE1-217ENST00000439669 SPEGQ15772 3267 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 B4DGG1 531 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 ASMTLO95671 621 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 FUCA1P04066 466 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 MPP3Q13368 585 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 LRRC8AQ8IWT6 810 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 TTC13Q8NBP0 860 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 EID2BQ96D98 161 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 MRGPRX2Q96LB1 330 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 GSDMCQ9BYG8 508 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 DPEP2Q9H4A9 486 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 RAD18Q9NS91 495 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 TRNAU1APQ9NX07 287 aaKnown RBP23.88■■□□□ 1.41
CPNE1-217ENST00000439669 GPSM3Q9Y4H4 160 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 SPO11Q9Y5K1 396 aa23.88■■□□□ 1.41
CPNE1-217ENST00000439669 LOC285095A0A1B0GVY8 99 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 FADS2P1A8MWK0 482 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 NRDCO43847 1150 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 CCDC175P0C221 793 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 CHRNA4P43681 627 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 SIRPB2Q5JXA9 342 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 TMC3Q7Z5M5 1100 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 DCBLD1Q8N8Z6 715 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 MDM1Q8TC05 714 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 COX14Q96I36 57 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 OR2M4Q96R27 311 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 SPATA16Q9BXB7 569 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 CDH19Q9H159 772 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 SYNDIG1Q9H7V2 258 aa23.87■■□□□ 1.41
CPNE1-217ENST00000439669 KNTC1P50748 2209 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 EPOP01588 193 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 GEMP55040 296 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 DCDC1P59894 354 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 ZNF569Q5MCW4 686 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 ANKRD20A2Q5SQ80 823 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 SEL1L2Q5TEA6 688 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 ANKRD20A1Q5TYW2 823 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 ANKRD20A3Q5VUR7 823 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 CDCP2Q5VXM1 449 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 GPR26Q8NDV2 337 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 CCDC110Q8TBZ0 833 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 GPBAR1Q8TDU6 330 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 CCDC74AQ96AQ1 378 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 NXPE2Q96DL1 559 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 DEPDC7Q96QD5 511 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 CCDC3Q9BQI4 270 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 LZTFL1Q9NQ48 299 aa23.86■■□□□ 1.41
CPNE1-217ENST00000439669 AURKAO14965 403 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 ZNF189O75820 626 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-217ENST00000439669 ANXA9O76027 345 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 ATP1A1P05023 1023 aaKnown RBP23.85■■□□□ 1.41
CPNE1-217ENST00000439669 HLA-DPA1P20036 260 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 AK4P27144 223 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-217ENST00000439669 PSMB4P28070 264 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 ADCY8P40145 1251 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 PRPSAP1Q14558 356 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 SLC1A5Q15758 541 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 SLC30A9Q6PML9 568 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 GALNT13Q8IUC8 556 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 CACTIN-AS1Q8N1I8 211 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 GPR156Q8NFN8 814 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 BLOC1S5Q8TDH9 187 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 SCARF2Q96GP6 870 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-217ENST00000439669 SPATA13Q96N96 652 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 FICDQ9BVA6 458 aa23.85■■□□□ 1.41
CPNE1-217ENST00000439669 CNOT6Q9ULM6 557 aaKnown RBP23.85■■□□□ 1.41
CPNE1-217ENST00000439669 OAS3Q9Y6K5 1087 aaKnown RBP23.85■■□□□ 1.41
CPNE1-217ENST00000439669 IGF2RP11717 2491 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 FGF1P05230 155 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 BPIP17213 487 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 CCZ1BP86790 482 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 CCZ1P86791 482 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-217ENST00000439669 CTBSQ01459 385 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 CYP4F3Q08477 520 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 KLF1Q13351 362 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-217ENST00000439669 NRROSQ86YC3 692 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 SFTPA2Q8IWL1 248 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 ALS2CR12Q96Q35 445 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 ZSCAN5AQ9BUG6 496 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 TRABDQ9H4I3 376 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 GRPEL1Q9HAV7 217 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 BPIFA1Q9NP55 256 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 HACD3Q9P035 362 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 TAAR2Q9P1P5 351 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms