RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SH2D5Q6ZV89 423 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 LSMEM1Q8N8F7 131 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 B3GALNT2Q8NCR0 500 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 WNT8BQ93098 351 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 HDAC11Q96DB2 347 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 C8orf48Q96LL4 319 aa15.77■□□□□ 0.12
DHFR-201ENST00000439211 COL11A2P13942 1736 aaPredicted RBP15.77■□□□□ 0.12
DHFR-201ENST00000439211 KIAA1217Q5T5P2 1943 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 CDK2AP1O14519 115 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 NOS1APO75052 506 aaPredicted RBP15.77■□□□□ 0.11
DHFR-201ENST00000439211 CPNE3O75131 537 aaKnown RBP15.77■□□□□ 0.11
DHFR-201ENST00000439211 B3GALNT1O75752 331 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 MLNP12872 115 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 YBX3P16989 372 aaKnown RBP eCLIP15.77■□□□□ 0.117e-10■□□□□ 10
DHFR-201ENST00000439211 RPL14P50914 215 aaKnown RBP15.77■□□□□ 0.11
DHFR-201ENST00000439211 MCCD1P59942 119 aaPredicted RBP15.77■□□□□ 0.11
DHFR-201ENST00000439211 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 ARL13AQ5H913 290 aaPredicted RBP15.77■□□□□ 0.11
DHFR-201ENST00000439211 NAPEPLDQ6IQ20 393 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 SLC41A1Q8IVJ1 513 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 OR8H2Q8N162 312 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 SCML4Q8N228 414 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 OR5H6Q8NGV6 325 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 ASB9Q96DX5 294 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 YME1L1Q96TA2 773 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 MAT2BQ9NZL9 334 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 BTBD3Q9Y2F9 522 aa15.77■□□□□ 0.11
DHFR-201ENST00000439211 LOC105371267A0A1B0GV96 52 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 DHRS12A0PJE2 317 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 H0YJX3 145 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 DPYSL4O14531 572 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 NRP1O14786 923 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 EDNRBP24530 442 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 KRR1Q13601 381 aaKnown RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 CSHL1Q14406 222 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 ZNF460Q14592 562 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 ZNF534Q76KX8 674 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 TICAM1Q8IUC6 712 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 SHCBP1Q8NEM2 672 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 JPH3Q8WXH2 748 aaPredicted RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 RORBQ92753 470 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 PHF21BQ96EK2 531 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 DHRS9Q9BPW9 319 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 KCTD14Q9BQ13 255 aaPredicted RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 PRRG3Q9BZD7 231 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 WBP11Q9Y2W2 641 aaKnown RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 HDAC3O15379 428 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 PRKD3O94806 890 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 ELK4P28324 431 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 OR2B6P58173 313 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 TAF2Q6P1X5 1199 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 NT5DC4Q86YG4 428 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 NXNL1Q96CM4 212 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 MAP6Q96JE9 813 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 HSFY1Q96LI6 401 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 SMPD3Q9NY59 655 aaPredicted RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 PCDH10Q9P2E7 1040 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 EVPLQ92817 2033 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 BCAS1O75363 584 aaPredicted RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 IL32P24001 234 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 CAPGP40121 348 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 SLC7A2P52569 658 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 SPCS2Q15005 226 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 SAMD4BQ5PRF9 694 aaKnown RBP15.76■□□□□ 0.11
DHFR-201ENST00000439211 PPP4R4Q6NUP7 873 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 STRADAQ7RTN6 431 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 RBBP8Q99708 897 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 LHPPQ9H008 270 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 MROH8Q9H579 483 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 ATP6V1HQ9UI12 483 aa15.76■□□□□ 0.11
DHFR-201ENST00000439211 H3BUI4 141 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 MRASO14807 208 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 TBC1D4O60343 1298 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 MPOP05164 745 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 HNRNPLP14866 589 aaKnown RBP eCLIP15.75■□□□□ 0.113e-6■■■□□ 17.7
DHFR-201ENST00000439211 CYP51A1Q16850 503 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 COLEC12Q5KU26 742 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 NLGN2Q8NFZ4 835 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 TBATAQ96M53 351 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 ZNF778Q96MU6 729 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 UBA2Q9UBT2 640 aaPredicted RBP15.75■□□□□ 0.11
DHFR-201ENST00000439211 KCNN3Q9UGI6 736 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 ARPC4-TTLL3A0A0A6YYG9 625 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 B8ZZF3 427 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 INHBBP09529 407 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 GRM3Q14832 879 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 RTP4Q96DX8 246 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 CCDC120Q96HB5 630 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 FCRL3Q96P31 734 aaPredicted RBP15.75■□□□□ 0.11
DHFR-201ENST00000439211 FUNDC2Q9BWH2 189 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 CPNE5Q9HCH3 593 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 SPAG4Q9NPE6 437 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 XPR1Q9UBH6 696 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 NUDT5Q9UKK9 219 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 EMCNQ9ULC0 261 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 PCDHB12Q9Y5F1 795 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 CITO14578 2027 aa15.75■□□□□ 0.11
DHFR-201ENST00000439211 ZW10O43264 779 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms