RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MED8Q96G25 268 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 CDRT15Q96T59 188 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 KCNK13Q9HB14 408 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 TMEM165Q9HC07 324 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 ETAA1Q9NY74 926 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 SPASTQ9UBP0 616 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF229Q9UJW7 825 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 SAC3D1A6NKF1 404 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 PSMD12O00232 456 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 MRASO14807 208 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 AHSGP02765 367 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 SERINC3Q13530 473 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 DSC3Q14574 896 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 VWA5B1Q5TIE3 1220 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 LPCAT4Q643R3 524 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 GSTCDQ8NEC7 633 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 ELMO1Q92556 727 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 C17orf80Q9BSJ5 609 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 COPS7BQ9H9Q2 264 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 PARVBQ9HBI1 364 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 MTRRQ9UBK8 725 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 POLG2Q9UHN1 485 aa11.54□□□□□ -0.56
TRAPPC9-202ENST00000438773 TGDSO95455 350 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 PRAMEF1O95521 474 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ADH1CP00326 375 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ANXA5P08758 320 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 POLD2P49005 469 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ARHGDIAP52565 204 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC18A1P54219 525 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 SEMG2Q02383 582 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 C16orf72Q14CZ0 275 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC44A4Q53GD3 710 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 IL27RAQ6UWB1 636 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CHST9Q7L1S5 443 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 UMODL1-AS1Q8N2C9 162 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CDYL2Q8N8U2 506 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 HEXDCQ8WVB3 486 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ACDQ96AP0 544 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CSNK1G1Q9HCP0 422 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 LNPEPQ9UIQ6 1025 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 TBC1D30Q9Y2I9 924 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF840PA6NDX5 716 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 IRF9Q00978 393 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ATP1A4Q13733 1029 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 FBXO48Q5FWF7 155 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 DOK6Q6PKX4 331 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CERS6Q6ZMG9 384 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 VPS37AQ8NEZ2 397 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 RTP4Q96DX8 246 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ANKRD27Q96NW4 1050 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 STN1Q9H668 368 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 KLQ9UEF7 1012 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 BTRCQ9Y297 605 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 GLYATL1P3A0A0U1RQE8 302 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 EVPLLA8MZ36 301 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 LBPP18428 481 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 IRGCQ6NXR0 463 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ARHGAP22Q7Z5H3 698 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CHPFQ8IZ52 775 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 CNDP1Q96KN2 507 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 HAUS8Q9BT25 410 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 RUBCNLQ9H714 662 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF212Q9UDV6 495 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
TRAPPC9-202ENST00000438773 LOXHD1Q8IVV2 1947 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 MAFKO60675 156 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 PRAMEF11O60813 436 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 CATP04040 527 aaKnown RBP11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC18A2Q05940 514 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 CAMK2GQ13555 558 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 AASDHQ4L235 1098 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 GET4Q7L5D6 327 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 MIER2Q8N344 545 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 CATSPER1Q8NEC5 780 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 CDKN2AIPNLQ96HQ2 116 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 TRMOQ9BU70 441 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC25A23Q9BV35 468 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 CROTQ9UKG9 612 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 NDUFAF1Q9Y375 327 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 TRAF6Q9Y4K3 522 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 SDK1Q7Z5N4 2213 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 KNL1Q8NG31 2342 aa11.52□□□□□ -0.56
TRAPPC9-202ENST00000438773 NEMP2A6NFY4 417 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 TEX28O15482 410 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 PCYT1AP49585 367 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 ROR2Q01974 943 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 OCA2Q04671 838 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 SGCGQ13326 291 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 FRG1Q14331 258 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 ZYG11AQ6WRX3 759 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 RIPOR1Q6ZS17 1223 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 CDHR3Q6ZTQ4 885 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 BEND5Q7L4P6 421 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 CUZD1Q86UP6 607 aa11.52□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms