RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
EXT1-202ENST00000436216 RP1P56715 2156 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 CPED1A4D0V7 1026 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 FADS2P1A8MWK0 482 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 H7C0C1 242 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 NOBOXO60393 691 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 PMPCBO75439 489 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 FTCDO95954 541 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 RBP3P10745 1247 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 ATP5OP48047 213 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 POLD2P49005 469 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 DCDC1P59894 354 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 KLF1Q13351 362 aaPredicted RBP12.32□□□□□ -0.44
EXT1-202ENST00000436216 MPP3Q13368 585 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 PERM1Q5SV97 790 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 CCDC181Q5TID7 509 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 TAF8Q7Z7C8 310 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 C17orf82Q86X59 251 aaPredicted RBP12.32□□□□□ -0.44
EXT1-202ENST00000436216 KYQ8NBH2 561 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 CCDC112Q8NEF3 446 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 FAM46DQ8NEK8 389 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 OR6C4Q8NGE1 309 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 MDM1Q8TC05 714 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 MAPK15Q8TD08 544 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 GORASP1Q9BQQ3 440 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 TSGA10Q9BZW7 698 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 TRABDQ9H4I3 376 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 C10orf88Q9H8K7 445 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 CARS2Q9HA77 564 aaKnown RBP12.32□□□□□ -0.44
EXT1-202ENST00000436216 UBP1Q9NZI7 540 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 MOSPD1Q9UJG1 213 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 SHOC2Q9UQ13 582 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 ZNF711Q9Y462 761 aa12.32□□□□□ -0.44
EXT1-202ENST00000436216 COL27A1Q8IZC6 1860 aaPredicted RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 BPTFQ12830 3046 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 CACNA1BQ00975 2339 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 DNAJC6O75061 913 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 ZNF189O75820 626 aaPredicted RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 PIRTP0C851 137 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 HMGCLP35914 325 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 ADCY8P40145 1251 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 EIF3EP60228 445 aaKnown RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 TCEA2Q15560 299 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 PYCR3Q53H96 274 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 SIRPB2Q5JXA9 342 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 PDPK2PQ6A1A2 396 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 CDKL3Q8IVW4 592 aaPredicted RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 LRRC8AQ8IWT6 810 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 KLHDC8BQ8IXV7 354 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 GPR26Q8NDV2 337 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 WDR48Q8TAF3 677 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 FERMT1Q9BQL6 677 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 ABCG4Q9H172 646 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 GBA3Q9H227 469 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 RAD18Q9NS91 495 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 SPATS2LQ9NUQ6 558 aaKnown RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 VPS18Q9P253 973 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 GULP1Q9UBP9 304 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 TMEM98Q9Y2Y6 226 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 SPO11Q9Y5K1 396 aa12.31□□□□□ -0.44
EXT1-202ENST00000436216 OAS3Q9Y6K5 1087 aaKnown RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 ARHGEF17Q96PE2 2063 aaPredicted RBP12.31□□□□□ -0.44
EXT1-202ENST00000436216 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
EXT1-202ENST00000436216 AURKAO14965 403 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 INPP4BO15327 924 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 KRT86O43790 486 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 TCEA3O75764 348 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ANXA9O76027 345 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 FGF1P05230 155 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 PNLIPP16233 465 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 GLB1P16278 677 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 BPIP17213 487 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 HLA-DPA1P20036 260 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ADRA1AP35348 466 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 GNPDA1P46926 289 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 CTBSQ01459 385 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 CYP4F3Q08477 520 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ILF3Q12906 894 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■□□ 17.8
EXT1-202ENST00000436216 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
EXT1-202ENST00000436216 SLC1A5Q15758 541 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 C14orf28Q4W4Y0 310 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ANKRD20A2Q5SQ80 823 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ANKRD20A1Q5TYW2 823 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 ITPRIPL1Q6GPH6 555 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 DARS2Q6PI48 645 aaKnown RBP12.3□□□□□ -0.44
EXT1-202ENST00000436216 RANBP10Q6VN20 620 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 SLC35B2Q8TB61 432 aa12.3□□□□□ -0.44
EXT1-202ENST00000436216 DTX3LQ8TDB6 740 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms