RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 QRFPRQ96P65 431 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 PGLYRP2Q96PD5 576 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 DUX3Q96PT4 197 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 EIF2AK1Q9BQI3 630 aaKnown RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 LRRC1Q9BTT6 524 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 KIF9Q9HAQ2 790 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 SAGE1Q9NXZ1 904 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 HAO1Q9UJM8 370 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 OR2W1Q9Y3N9 320 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 CYSRT1A8MQ03 144 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 EIF3CLB5ME19 914 aaKnown RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 SPINT2O43291 252 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 PYGLP06737 847 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 PRSS1P07477 247 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 KRT10P13645 584 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 POLR2CP19387 275 aaPredicted RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 FASLGP48023 281 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 GLIPR1P48060 266 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 HILS1P60008 231 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 ISL1P61371 349 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 DCTN2Q13561 401 aaKnown RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 ZNF234Q14588 700 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 ALG11Q2TAA5 492 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 TMEM35AQ53FP2 167 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 CEP85LQ5SZL2 805 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 GPR180Q86V85 440 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 ARMC8Q8IUR7 673 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 CCDC13Q8IYE1 715 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 SLC24A4Q8NFF2 622 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 WBP2Q969T9 261 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 NEURL2Q9BR09 285 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 PCGF1Q9BSM1 259 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 RANBP17Q9H2T7 1088 aaKnown RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 ACSS1Q9NUB1 689 aaPredicted RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 FAF1Q9UNN5 650 aaPredicted RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 PTPRCP08575 1304 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 ERVV-2B6SEH9 535 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 ZNF182P17025 639 aaPredicted RBP3.26□□□□□ -1.89
CLK1-204ENST00000432425 CD53P19397 219 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 CDKN1AP38936 164 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 HOXA1P49639 335 aaPredicted RBP3.26□□□□□ -1.89
CLK1-204ENST00000432425 TAS2R38P59533 333 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 DCST1Q5T197 706 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 STXBP5Q5T5C0 1151 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 PLA2G4FQ68DD2 849 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 CDC73Q6P1J9 531 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 ASB18Q6ZVZ8 466 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 GRAPLQ8TC17 118 aaPredicted RBP3.26□□□□□ -1.89
CLK1-204ENST00000432425 MORC4Q8TE76 937 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 GRAMD2BQ96HH9 432 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 PCYT2Q99447 389 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 SLC28A3Q9HAS3 691 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 FAM118AQ9NWS6 357 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 DLGAP4Q9Y2H0 992 aa3.26□□□□□ -1.89
CLK1-204ENST00000432425 HS3ST1O14792 307 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 ZNHIT1O43257 154 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 EIF3JO75822 258 aaKnown RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 CGAP01215 116 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 HOXC9P31274 260 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 AMPHP49418 695 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 HARS2P49590 506 aaKnown RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 CRIP2P52943 208 aaPredicted RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 GRIK2Q13002 908 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 CCDC6Q16204 474 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 SIRPB2Q5JXA9 342 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 ZNF280DQ6N043 979 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 BRAT1Q6PJG6 821 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 TSSK4Q6SA08 328 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 ZNF852Q6ZMS4 543 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 DPPA4Q7L190 304 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 HEATR4Q86WZ0 1026 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 BEST3Q8N1M1 668 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 HMGCLL1Q8TB92 370 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 RRNAD1Q96FB5 475 aaKnown RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 NR1H4Q96RI1 486 aaPredicted RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 ACOX2Q99424 681 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 POLR3CQ9BUI4 534 aaPredicted RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 C1QTNF5Q9BXJ0 243 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 PAIP1Q9H074 479 aaKnown RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 SEBOXQ9HB31 216 aaPredicted RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 INTS6Q9UL03 887 aaKnown RBP3.25□□□□□ -1.89
CLK1-204ENST00000432425 GAB2Q9UQC2 676 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 KLHL20Q9Y2M5 609 aa3.25□□□□□ -1.89
CLK1-204ENST00000432425 IL7RP16871 459 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 EPHA8P29322 1005 aaPredicted RBP3.24□□□□□ -1.89
CLK1-204ENST00000432425 TIMP3P35625 211 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 PIP4K2AP48426 406 aaPredicted RBP3.24□□□□□ -1.89
CLK1-204ENST00000432425 RARSP54136 660 aaKnown RBP3.24□□□□□ -1.89
CLK1-204ENST00000432425 MAD2L1Q13257 205 aaPredicted RBP3.24□□□□□ -1.89
CLK1-204ENST00000432425 OLIG2Q13516 323 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 EPHX4Q8IUS5 362 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 KLHDC8BQ8IXV7 354 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 CNBD1Q8NA66 436 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 THAP6Q8TBB0 222 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 SLC38A5Q8WUX1 472 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 PSPC1Q8WXF1 523 aaKnown RBP3.24□□□□□ -1.89
CLK1-204ENST00000432425 DNAAF4Q8WXU2 420 aa3.24□□□□□ -1.89
CLK1-204ENST00000432425 APBB2Q92870 758 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms