RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MTA2O94776 668 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 C22orf31O95567 290 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 HOXB2P14652 356 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 PIGAP37287 484 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 PRCPP42785 496 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ITGADQ13349 1161 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 RBMS2Q15434 407 aaKnown RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TWIST1Q15672 202 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 PNLIPRP3Q17RR3 467 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM266Q2M3C6 531 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZSCAN23Q3MJ62 389 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ALDH1L2Q3SY69 923 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF628Q5EBL2 1059 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TCP11X2Q5H9J9 407 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 WASHC2DQ5SRD0 308 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 FAM69BQ5VUD6 431 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 GGNBP1Q5YKI7 109 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 FRG2Q64ET8 278 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 RBPMS2Q6ZRY4 209 aaKnown RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 MON1BQ7L1V2 547 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TRAPPC11Q7Z392 1133 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 CNGA4Q8IV77 575 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 BEST3Q8N1M1 668 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 GUF1Q8N442 669 aaKnown RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 POMGNT2Q8NAT1 580 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 CLEC18CQ8NCF0 446 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 C7orf57Q8NEG2 295 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF548Q8NEK5 533 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 OR10S1Q8NGN2 331 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 RHBDF1Q96CC6 855 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 HARBI1Q96MB7 349 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF570Q96NI8 536 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 GFM1Q96RP9 751 aaKnown RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 CRAMP1Q96RY5 1269 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 GAD1Q99259 594 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 PCGF1Q9BSM1 259 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 MRIQ9BWK5 157 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 KLHL4Q9C0H6 718 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ISCUQ9H1K1 167 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 PIGMQ9H3S5 423 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 RABEP2Q9H5N1 569 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ERVMER34-1Q9H9K5 563 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC28A3Q9HAS3 691 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 EPB41L5Q9HCM4 733 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 KRCC1Q9NPI7 259 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 CCDC177Q9NQR7 707 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ACSS1Q9NUB1 689 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 OR6C3Q9NZP0 311 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 IL36RNQ9UBH0 155 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TINAGQ9UJW2 476 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 SRPRBQ9Y5M8 271 aaKnown RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 HS3ST3B1Q9Y662 390 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ASTN2O75129 1339 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARAP1Q96P48 1450 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 TTC3P53804 2025 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 IGLV5-39A0A0G2JS06 123 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 LRRC72A6NJI9 287 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 BECN2A8MW95 431 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 M0QZ24 198 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZC3H11AO75152 810 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 CREG1O75629 220 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 VNN2O95498 520 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 TOMM40O96008 361 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 FYNP06241 537 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 TPOP07202 933 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 EIF2S3P41091 472 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 APOBEC1P41238 236 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 RFX2P48378 723 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF41P51814 821 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 INHBEP58166 350 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 KRT83P78385 493 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SRSF4Q08170 494 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 GRIK2Q13002 908 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SNTB1Q13884 538 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 KCNC3Q14003 757 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 NEDD9Q14511 834 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 DLG2Q15700 870 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 DECR1Q16698 335 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 EIF2S3LQ2VIR3 472 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 MYLK3Q32MK0 819 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 RAB6CQ53S08 254 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 C9orf152Q5JTZ5 239 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 C1QTNF12Q5T7M4 302 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 NSUN5P2Q63ZY6 315 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 TAOK1Q7L7X3 1001 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SHFQ7M4L6 423 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 CTU1Q7Z7A3 348 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARID3BQ8IVW6 561 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 CHERPQ8IWX8 916 aaKnown RBP3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 XXYLT1Q8NBI6 393 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC38A9Q8NBW4 561 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 OR8K5Q8NH50 307 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 PRSS3P2Q8NHM4 247 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC22A12Q96S37 553 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 GFI1Q99684 422 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 APOL6Q9BWW8 343 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 GPR88Q9GZN0 384 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 RAB6CQ9H0N0 254 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 CATSPERBQ9H7T0 1116 aa3.16□□□□□ -1.9
HMGB1P27-201ENST00000431429 GPR108Q9NPR9 543 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms