RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 ANKRD66B4E2M5 251 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 MAP3K7O43318 606 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 FKBP6O75344 327 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.188e-11■■■□□ 15.9
RBM39-212ENST00000429968 RHOBTB1O94844 696 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 CRTAMO95727 393 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 RAG1P15918 1043 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 PEX2P28328 305 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 GKP32189 559 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 MC4RP32245 332 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 SLC26A3P40879 764 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 CSKP41240 450 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 INHBCP55103 352 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 PDAP1Q13442 181 aaKnown RBP13.9□□□□□ -0.18
RBM39-212ENST00000429968 PTK2BQ14289 1009 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 TSNQ15631 228 aaKnown RBP13.9□□□□□ -0.18
RBM39-212ENST00000429968 SFT2D3Q587I9 215 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 NCEH1Q6PIU2 408 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 SLC22A9Q8IVM8 553 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 APCDD1Q8J025 514 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 GABPB2Q8TAK5 448 aaPredicted RBP13.9□□□□□ -0.18
RBM39-212ENST00000429968 GDPD5Q8WTR4 605 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 TMA16Q96EY4 203 aaKnown RBP13.9□□□□□ -0.18
RBM39-212ENST00000429968 ALG14Q96F25 216 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 TRMT2BQ96GJ1 504 aaKnown RBP13.9□□□□□ -0.18
RBM39-212ENST00000429968 TUBB1Q9H4B7 451 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 WDR41Q9HAD4 459 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
RBM39-212ENST00000429968 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 RIMKLBQ9ULI2 386 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 DNAJC15Q9Y5T4 150 aa13.9□□□□□ -0.18
RBM39-212ENST00000429968 NPEPPSL1A6NEC2 478 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 GFRA2O00451 464 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 MAP3K13O43283 966 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 SMAD6O43541 496 aaKnown RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 SRP72O76094 671 aaKnown RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 TSPAN12O95859 305 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 ALPIP09923 528 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 CCL5P13501 91 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 CTPS1P17812 591 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 AGTR2P50052 363 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 CYP4F8P98187 520 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 ECT2LQ008S8 904 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 HERC3Q15034 1050 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 PTPRNQ16849 979 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 AAGABQ6PD74 315 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 BNC2Q6ZN30 1099 aaPredicted RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 LARP4Q71RC2 724 aaKnown RBP eCLIP13.89□□□□□ -0.19
RBM39-212ENST00000429968 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 PCDH20Q8N6Y1 951 aaKnown RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 SIDT2Q8NBJ9 832 aaKnown RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 ESAMQ96AP7 390 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 FEM1AQ9BSK4 669 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 TM6SF2Q9BZW4 377 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 PLK2Q9NYY3 685 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 CCDC167Q9P0B6 97 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 GMPR2Q9P2T1 348 aaKnown RBP13.89□□□□□ -0.19
RBM39-212ENST00000429968 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 VPS51Q9UID3 782 aa13.89□□□□□ -0.19
RBM39-212ENST00000429968 C9JVG2 144 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 PRRG1O14668 218 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 SLC22A2O15244 555 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 ECI2O75521 394 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 TCN1P20061 433 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 PSMA3P25788 255 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 YBX1P67809 324 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 TAF12Q16514 161 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 PGAM4Q8N0Y7 254 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 ECSITQ9BQ95 431 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 EML4Q9HC35 981 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 INTS10Q9NVR2 710 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 LRCH1Q9Y2L9 728 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 INSL5Q9Y5Q6 135 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 NCF1BA6NI72 391 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 NCF1CA8MVU1 366 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 H0Y626 953 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 NCF1P14598 390 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 HK3P52790 923 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 NME5P56597 212 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 IKBKEQ14164 716 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 GRB7Q14451 532 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 RFTN1Q14699 578 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 UGT3A1Q6NUS8 523 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 SDCCAG8Q86SQ7 713 aaPredicted RBP13.88□□□□□ -0.19
RBM39-212ENST00000429968 FUNDC1Q8IVP5 155 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 TRPC4APQ8TEL6 797 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 TOP1MTQ969P6 601 aa13.88□□□□□ -0.19
RBM39-212ENST00000429968 CEP295NLQ96MC4 621 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms