RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 MX2P20592 715 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 SERPINA4P29622 427 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 MMP12P39900 470 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 PEX5P50542 639 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 SCNN1BP51168 640 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 MAPK10P53779 464 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 MAXP61244 160 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 ZNF235Q14590 738 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 UGP2Q16851 508 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 TMEM52BQ4KMG9 183 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 TFDP3Q5H9I0 405 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 ZFYVE27Q5T4F4 411 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 NPNTQ6UXI9 565 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 SPOCD1Q6ZMY3 1216 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 B3GNT8Q7Z7M8 397 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 TTC7BQ86TV6 843 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 ATL2Q8NHH9 583 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 LRRN4Q8WUT4 740 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 HERPUD2Q9BSE4 406 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 NOD2Q9HC29 1040 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 PCDH12Q9NPG4 1184 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 STARD5Q9NSY2 213 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 AKAP7Q9P0M2 348 aaPredicted RBP10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 TRIM10Q9UDY6 481 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 AMACRQ9UHK6 382 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 GPR34Q9UPC5 381 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 PCDHA3Q9Y5H8 950 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 BSNQ9UPA5 3926 aa10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 ZFC3H1O60293 1989 aaKnown RBP10.85□□□□□ -0.67
APOBEC3C-202ENST00000428892 SPTA1P02549 2419 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CASC3O15234 703 aaKnown RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 NVLO15381 856 aaKnown RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 FZD6O60353 706 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 MMP20O60882 483 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ZRANB2O95218 330 aaKnown RBP eCLIP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 NTRK1P04629 796 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CCNB1P14635 433 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 PECAM1P16284 738 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ZFXP17010 805 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ITIH1P19827 911 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CTNNA2P26232 953 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 PTPN7P35236 360 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 HK3P52790 923 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CCL7P80098 99 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 IFI35P80217 286 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 BCL2L1Q07817 233 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 TRAF2Q12933 501 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 RALGDSQ12967 914 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 TUBB2AQ13885 445 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 AGERQ15109 404 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 PPP2R5EQ16537 467 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 COLEC12Q5KU26 742 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ZNF569Q5MCW4 686 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 PHF19Q5T6S3 580 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 TMEM164Q5U3C3 297 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ENPP7Q6UWV6 458 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 NT5DC3Q86UY8 548 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 VASH2Q86V25 355 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 RFX6Q8HWS3 928 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CCNJLQ8IV13 435 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CCDC13Q8IYE1 715 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 RCOR2Q8IZ40 523 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 BBS5Q8N3I7 341 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CNTD1Q8N815 330 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 Q8N9G6 341 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ARRDC2Q8TBH0 407 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 NSMCE1Q8WV22 266 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ALG3Q92685 438 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 TMEM159Q96B96 161 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CMKLR1Q99788 373 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 WRAP53Q9BUR4 548 aaKnown RBP10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 TUBB2BQ9BVA1 445 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 CLPBQ9H078 707 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 LRRN3Q9H3W5 708 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 NT5MQ9NPB1 228 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 KLQ9UEF7 1012 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 ATP8A1Q9Y2Q0 1164 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 HEY1Q9Y5J3 304 aa10.84□□□□□ -0.67
APOBEC3C-202ENST00000428892 PRAMEF33A0A0G2JMD5 474 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 CCDC66A2RUB6 948 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 CTAGE9A4FU28 777 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 CFAP69A5D8W1 941 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 SUV39H1O43463 412 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 CST8O60676 142 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 PRAMEF10O60809 474 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 PRKCGP05129 697 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 HLA-DQB2P05538 268 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 CELA2BP08218 269 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 MMP2P08253 660 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 GM2AP17900 193 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 CCKBRP32239 447 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 NR2C2P49116 596 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 COPS2P61201 443 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 DYNLT1P63172 113 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 TLE1Q04724 770 aa10.83□□□□□ -0.68
APOBEC3C-202ENST00000428892 NIPAL4Q0D2K0 466 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms