RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 GPC6Q9Y625 555 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 TRPM1Q7Z4N2 1603 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FAM86C2PA6NEL3 165 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PLIN3O60664 434 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FESP07332 822 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 HEXBP07686 556 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ATP1A3P13637 1013 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MGAT1P26572 445 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PGDP52209 483 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 HK2P52789 917 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 RRP1BQ14684 758 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 AKIRIN2Q53H80 203 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 AGBL2Q5U5Z8 902 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ZNF549Q6P9A3 640 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TXNDC11Q6PKC3 985 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ENPP7Q6UWV6 458 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 PLPPR4Q7Z2D5 763 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 LYSMD3Q7Z3D4 306 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 RABEPKQ7Z6M1 372 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SLC9B2Q86UD5 537 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 LRRC6Q86X45 466 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 KREMEN2Q8NCW0 462 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 C2orf15Q8WU43 125 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 SHC3Q92529 594 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ERP44Q9BS26 406 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 WRAP53Q9BUR4 548 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 CHID1Q9BWS9 393 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 UNKQ9C0B0 810 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 KLHL4Q9C0H6 718 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TNKS2Q9H2K2 1166 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TMEM138Q9NPI0 162 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 OSER1Q9NX31 292 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 C15orf38-AP3S2A0A0A6YYH1 394 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SEMA3DO95025 777 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PAHP00439 452 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PDHA2P29803 388 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CORO1AP31146 461 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 CNTN2Q02246 1040 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 GHRHRQ02643 423 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 C1QBPQ07021 282 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 VPS26BQ4G0F5 336 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PCID2Q5JVF3 399 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ARHGAP40Q5TG30 622 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 GJB7Q6PEY0 223 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 UBE2R2Q712K3 238 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 ARHGAP22Q7Z5H3 698 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ARPINQ7Z6K5 226 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SCUBE3Q8IX30 993 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CADM2Q8N3J6 435 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 GIPC3Q8TF64 312 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PTCD2Q8WV60 388 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 PPP3R2Q96LZ3 170 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ZSWIM3Q96MP5 696 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MCMBPQ9BTE3 642 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TRIM2Q9C040 744 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 DDX18Q9NVP1 670 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 B4GALT7Q9UBV7 327 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 LAMP5Q9UJQ1 280 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SERTAD3Q9UJW9 196 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PLSCR1O15162 318 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 FDPSP14324 419 aaKnown RBP5.71□□□□□ -1.49
HERC4-206ENST00000427635 PSMB9P28065 219 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 MNDAP41218 407 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 FXR1P51114 621 aaKnown RBP eCLIP5.71□□□□□ -1.49
HERC4-206ENST00000427635 ALDH3A2P51648 485 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 RGS8P57771 180 aaPredicted RBP5.71□□□□□ -1.49
HERC4-206ENST00000427635 AP1S1P61966 158 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 FASTKQ14296 549 aaKnown RBP5.71□□□□□ -1.49
HERC4-206ENST00000427635 TBCELQ5QJ74 424 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 CCNYL2Q5T2Q4 361 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 MLIPQ5VWP3 458 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 PRSS58Q8IYP2 241 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 ENKURQ8TC29 256 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 GIMAP1Q8WWP7 306 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 CLP1Q92989 425 aaKnown RBP5.71□□□□□ -1.49
HERC4-206ENST00000427635 C12orf66Q96MD2 445 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 TEFMQ96QE5 360 aaKnown RBP5.71□□□□□ -1.49
HERC4-206ENST00000427635 LGMNQ99538 433 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 ANKZF1Q9H8Y5 726 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 PYCARDQ9ULZ3 195 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 USP15Q9Y4E8 981 aaPredicted RBP5.71□□□□□ -1.49
HERC4-206ENST00000427635 IRAK3Q9Y616 596 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 PTCH2Q9Y6C5 1203 aa5.71□□□□□ -1.49
HERC4-206ENST00000427635 TMEM265A0A087WTH1 108 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 A0A0X1KG70 313 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 DDTLA6NHG4 134 aaPredicted RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 TTC34A8MYJ7 566 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 SYN3O14994 580 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 CLDN11O75508 207 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 FASP25445 335 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 MSLNQ13421 630 aaPredicted RBP5.71□□□□□ -1.5
HERC4-206ENST00000427635 NFE2L1Q14494 772 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 FAM151BQ6UXP7 276 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 AADATQ8N5Z0 425 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 DEFB119Q8N690 84 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 PLA2G15Q8NCC3 412 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 PLD4Q96BZ4 506 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 COPS8Q99627 209 aa5.71□□□□□ -1.5
HERC4-206ENST00000427635 TMEM121BQ9BXQ6 578 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms