RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 PSMD8P48556 350 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 ZDHHC20Q5W0Z9 365 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 GALNT5Q7Z7M9 940 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 C12orf56Q8IXR9 622 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 DAW1Q8N136 415 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 ZBTB2Q8N680 514 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 OR4K2Q8NGD2 314 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 TRPM4Q8TD43 1214 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 CLK4Q9HAZ1 481 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 EXD2Q9NVH0 621 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 BBIP1A8MTZ0 92 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 PRR5-ARHGAP8B1AHC4 643 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 BTN3A3O00478 584 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 TGFB1I1O43294 461 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 CLDN11O75508 207 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 MTRF1O75570 445 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 FAM155BO75949 473 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 TFPIP10646 304 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 RTP1P59025 263 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 ARHGAP8P85298 464 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 BMT2Q1RMZ1 405 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 CCNYL2Q5T2Q4 361 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 UTS2BQ765I0 119 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 BRINP2Q9C0B6 783 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 GULP1Q9UBP9 304 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 KIAA1210Q9ULL0 1709 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 STX16-NPEPL1H3BU86 382 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 STX16O14662 325 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 PCCBP05166 539 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 S100GP29377 79 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 AQP1P29972 269 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 TGFBR2P37173 567 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 CDK9P50750 372 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 ACLYP53396 1101 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 RGMBQ6NW40 437 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 PSRC1Q6PGN9 363 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 STRADAQ7RTN6 431 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 OR2T12Q8NG77 320 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 AP2M1Q96CW1 435 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 TSSK3Q96PN8 268 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 AIF1LQ9BQI0 150 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 KCTD5Q9NXV2 234 aa17.9■□□□□ 0.46
ARHGEF28-203ENST00000426542 FGF19O95750 216 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 ZNF132P52740 706 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 OLFML2AQ68BL7 652 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 ZBTB46Q86UZ6 589 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 TIFAQ96CG3 184 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 ACSS2Q9NR19 701 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 ZNF446Q9NWS9 450 aa17.89■□□□□ 0.46
ARHGEF28-203ENST00000426542 SMIM35A0A1B0GVV1 85 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 ATG13O75143 517 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 IL12AP29459 219 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 MSX2P35548 267 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 CAPGP40121 348 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 GLUD2P49448 558 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 NOMO1Q15155 1222 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 PARP15Q460N3 678 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 CEP68Q76N32 757 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 TRABD2AQ86V40 505 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 CPA6Q8N4T0 437 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 COX4I2Q96KJ9 171 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 MRTO4Q9UKD2 239 aaKnown RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 SAMD4AQ9UPU9 718 aaKnown RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 COL1A2P08123 1366 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 TIPRLO75663 272 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 PRKAR1AP10644 381 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 IGFALSP35858 605 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 TUSC3Q13454 348 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 C15orf52Q6ZUT6 534 aaKnown RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 CSPG4P5Q96PW8 444 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 PCDHB18PQ96TA0 734 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 TNKS2Q9H2K2 1166 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 FADS2O95864 444 aaKnown RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 APODP05090 189 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 JAZF1Q86VZ6 243 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 SLC34A3Q8N130 599 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 TCAIMQ8N3R3 496 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 LRRC17Q8N6Y2 441 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 ABCG4Q9H172 646 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 WDR55Q9H6Y2 383 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 EVLQ9UI08 416 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 EFR3BQ9Y2G0 817 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 RPTORQ8N122 1335 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 E9PAM4 449 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 MFSD11O43934 449 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 FSTL1Q12841 308 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 ZNF662Q6ZS27 426 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 OR10H5Q8NGA6 315 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 ADAMTS15Q8TE58 950 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 APOLD1Q96LR9 279 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 MFHAS1Q9Y4C4 1052 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 RAI2Q9Y5P3 530 aa17.89■□□□□ 0.45
ARHGEF28-203ENST00000426542 NRP2O60462 931 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 KELP23276 732 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 AKT2P31751 481 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 RPL5P46777 297 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 PTCD2Q8WV60 388 aaKnown RBP17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 S100ZQ8WXG8 99 aa17.88■□□□□ 0.45
ARHGEF28-203ENST00000426542 FCRL4Q96PJ5 515 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms