RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 FCRL5Q96RD9 977 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 VAT1Q99536 393 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 GBA3Q9H227 469 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 ZFYVE1Q9HBF4 777 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 ARFGAP3Q9NP61 516 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 PKD2L2Q9NZM6 624 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 DNPEPQ9ULA0 475 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 SUFUQ9UMX1 484 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 DOLKQ9UPQ8 538 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 PLEKHM1Q9Y4G2 1056 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 PCYT1BQ9Y5K3 369 aaPredicted RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 ST14Q9Y5Y6 855 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 OAS3Q9Y6K5 1087 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 ATP1A1P05023 1023 aaKnown RBP13.55□□□□□ -0.24
SNX3-204ENST00000426155 CCDC175P0C221 793 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 TEAD1P28347 426 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 CETN2P41208 172 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 ST3GAL2Q16842 350 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 ANKRD20A2Q5SQ80 823 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 ANKRD20A1Q5TYW2 823 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 ANKRD20A3Q5VUR7 823 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 TAF8Q7Z7C8 310 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 NRSN1Q8IZ57 195 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 GALNT15Q8N3T1 639 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 GPR26Q8NDV2 337 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 APOL2Q9BQE5 337 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 FICDQ9BVA6 458 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 GPR63Q9BZJ6 419 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 KCTD5Q9NXV2 234 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 GULP1Q9UBP9 304 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 TRHDEQ9UKU6 1024 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 SLC17A4Q9Y2C5 497 aa13.55□□□□□ -0.24
SNX3-204ENST00000426155 CELSR3Q9NYQ7 3312 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 LOC285095A0A1B0GVY8 99 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 B4DGG1 531 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 PDE2AO00408 941 aaPredicted RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 TNFRSF10CO14798 259 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 BUD23O43709 281 aaKnown RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 PROS1P07225 676 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 AK4P27144 223 aaPredicted RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 GDF10P55107 478 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 TARDBPQ13148 414 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX3-204ENST00000426155 ILKQ13418 452 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 CAMK2BQ13554 666 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 NR0B2Q15466 257 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 GKN2Q86XP6 184 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 NRROSQ86YC3 692 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 TAB3Q8N5C8 712 aaPredicted RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 ARL10Q8N8L6 244 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 MDM1Q8TC05 714 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 ZCCHC14Q8WYQ9 949 aaKnown RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 COX14Q96I36 57 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 FAM83DQ9H4H8 585 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 USP29Q9HBJ7 922 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 MAGEE1Q9HCI5 957 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 BPIFA1Q9NP55 256 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 RABGEF1Q9UJ41 708 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 CNOT6Q9ULM6 557 aaKnown RBP13.54□□□□□ -0.24
SNX3-204ENST00000426155 GPR34Q9UPC5 381 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 PRKAB1Q9Y478 270 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 KIF26BQ2KJY2 2108 aa13.54□□□□□ -0.24
SNX3-204ENST00000426155 ZZEF1O43149 2961 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 DMXL2Q8TDJ6 3036 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
SNX3-204ENST00000426155 GOLGA6L9A6NEM1 432 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 GPR39O43194 453 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 OPA1O60313 960 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 USP12O75317 370 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 ASMTLO95671 621 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 AGTP01019 485 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 JUPP14923 745 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 BPIP17213 487 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 MPP3Q13368 585 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 PTPRCAPQ14761 206 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 SEL1L2Q5TEA6 688 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 MEI1Q5TIA1 1274 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 ITPRIPL1Q6GPH6 555 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 CCDC70Q6NSX1 233 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 SLC30A9Q6PML9 568 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 TMPRSS12Q86WS5 348 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 TTC30BQ8N4P2 665 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 FAM71DQ8N9W8 422 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 MAPK15Q8TD08 544 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 BLOC1S5Q8TDH9 187 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 PATE1Q8WXA2 126 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 SPATA13Q96N96 652 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 FSD1LQ9BXM9 530 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 SPATS2LQ9NUQ6 558 aaKnown RBP13.53□□□□□ -0.24
SNX3-204ENST00000426155 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 PPP2R2CQ9Y2T4 447 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 GPSM3Q9Y4H4 160 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms