RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CYLC1P35663 651 aaPredicted RBP21.41■■□□□ 1.02
CDCP1-202ENST00000425231 GALNT3Q14435 633 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 KAZNQ674X7 775 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 BZW1Q7L1Q6 419 aaKnown RBP21.41■■□□□ 1.02
CDCP1-202ENST00000425231 KDELC2Q7Z4H8 507 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 CCNJLQ8IV13 435 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 KATNAL2Q8IYT4 538 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 ZDHHC1Q8WTX9 485 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 CNOT6Q9ULM6 557 aaKnown RBP21.41■■□□□ 1.02
CDCP1-202ENST00000425231 PLEKHM1Q9Y4G2 1056 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 CACNA1GO43497 2377 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 INPP4BO15327 924 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 ZRANB2O95218 330 aaKnown RBP eCLIP21.4■■□□□ 1.02
CDCP1-202ENST00000425231 PTPN3P26045 913 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 MARCKSL1P49006 195 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 SLC14A2Q15849 920 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 PYCR3Q53H96 274 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 TFDP3Q5H9I0 405 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 HENMT1Q5T8I9 393 aaKnown RBP21.4■■□□□ 1.02
CDCP1-202ENST00000425231 C11orf63Q6NUN7 778 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 SLC30A9Q6PML9 568 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 SPRED1Q7Z699 444 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 Q8N9G6 341 aaPredicted RBP21.4■■□□□ 1.02
CDCP1-202ENST00000425231 ZNF248Q8NDW4 579 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 SPATA22Q8NHS9 363 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 WDR36Q8NI36 951 aaKnown RBP21.4■■□□□ 1.02
CDCP1-202ENST00000425231 CCHCR1Q8TD31 782 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 TEKT5Q96M29 485 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 FAM83DQ9H4H8 585 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 GLOD4Q9HC38 313 aa21.4■■□□□ 1.02
CDCP1-202ENST00000425231 EPN1Q9Y6I3 576 aaPredicted RBP21.4■■□□□ 1.02
CDCP1-202ENST00000425231 BPTFQ12830 3046 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 CCDC187A0A096LP49 1063 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 RGSL1A5PLK6 1076 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 RCCD1A6NED2 376 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 SOWAHDA6NJG2 315 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 FADS2P1A8MWK0 482 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 ECEL1O95672 775 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 MT-CYBP00156 380 aaPredicted RBP21.39■■□□□ 1.02
CDCP1-202ENST00000425231 MAZP56270 477 aaKnown RBP21.39■■□□□ 1.02
CDCP1-202ENST00000425231 PCBP4P57723 403 aaKnown RBP21.39■■□□□ 1.02
CDCP1-202ENST00000425231 B4GALNT1Q00973 533 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 CDK18Q07002 472 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 CCDC173Q0VFZ6 552 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 WASHC5Q12768 1159 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 LYSMD3Q7Z3D4 306 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 SPACA3Q8IXA5 215 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 RCOR2Q8IZ40 523 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 NAGSQ8N159 534 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 TFB1MQ8WVM0 346 aaKnown RBP21.39■■□□□ 1.02
CDCP1-202ENST00000425231 LIN37Q96GY3 246 aaPredicted RBP21.39■■□□□ 1.02
CDCP1-202ENST00000425231 OR2M4Q96R27 311 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 FOXP3Q9BZS1 431 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 CDH19Q9H159 772 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 MAGEE1Q9HCI5 957 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 THSD1Q9NS62 852 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 PKD2L2Q9NZM6 624 aa21.39■■□□□ 1.02
CDCP1-202ENST00000425231 OAS3Q9Y6K5 1087 aaKnown RBP21.39■■□□□ 1.02
CDCP1-202ENST00000425231 hCG_1818297A0A087WSY0 165 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 NDUFA10O95299 355 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 HOXB3P14651 431 aaPredicted RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 CD68P34810 354 aaPredicted RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 TLE3Q04726 772 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 PCSK7Q16549 785 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 MARK2Q7KZI7 788 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ZNF438Q7Z4V0 828 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 GAS2L3Q86XJ1 694 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ARL14Q8N4G2 192 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 PATE1Q8WXA2 126 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 KRT35Q92764 455 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 P3H4Q92791 437 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ZFYVE1Q9HBF4 777 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 LUC7LQ9NQ29 371 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ATXN7L1Q9ULK2 861 aaPredicted RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 PCYT1BQ9Y5K3 369 aaPredicted RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 IGSF10Q6WRI0 2623 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 CDRT15L2A8MXV6 281 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 B4GAT1O43505 415 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 DNAJC6O75061 913 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ATP1A1P05023 1023 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 PIRTP0C851 137 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 RBMS1P29558 406 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 CCKBRP32239 447 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ACTR1BP42025 376 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 INHBCP55103 352 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ACTR1AP61163 376 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 ZFP36L1Q07352 338 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 NR1D2Q14995 579 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 FOXR1Q6PIV2 292 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 TMC3Q7Z5M5 1100 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 DAAM2Q86T65 1068 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 TMTC1Q8IUR5 882 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 NAF1Q96HR8 494 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 PRORYQ9H606 182 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 VPS18Q9P253 973 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 SHOC2Q9UQ13 582 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 REXO2Q9Y3B8 237 aaKnown RBP21.38■■□□□ 1.01
CDCP1-202ENST00000425231 DUSP10Q9Y6W6 482 aa21.38■■□□□ 1.01
CDCP1-202ENST00000425231 PTPRQQ9UMZ3 2332 aa21.37■■□□□ 1.01
CDCP1-202ENST00000425231 TMX2-CTNND1H3BSU7 103 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms